Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq3137 141 3e-29 >seq3137 Length=6657 Score = 141 bits (156), Expect = 3e-29 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40174 GAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGAT 40233 ||| |||| || | ||||||| ||| | |||||||| ||| ||||| || ||||||| Sbjct 1273 GAAATCGACATCGAAATCGGGCAAGGAGATGCGCTCGGTGTTGAGGAAGCGTTCGAAGAG 1332 Query 40234 GAGCCCGTGCTCCAGTGGATCGAGGTCGGTGAT-CCCGAGGCAGTAGGCGACCAGCGAAC 40292 | ||| | || |||||||| ||| ||| ||| |||| ||||||||||||||| | Sbjct 1333 CAAGTCGTAGTACAAGGGATCGAGATCGACGATGCCCAAGGC-GTAGGCGACCAGCGAGC 1391 Query 40293 CGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGA 40352 || | | ||||| ||||| || || ||| | ||||| |||||| ||||||| ||||| Sbjct 1392 CGACGCCGGAGCCCCGCCCCGGGCCCACCGGAATGCCGTGCTCCTTCGCCCAGCGGATGA 1451 Query 40353 AGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCAT 40389 | |||||||||| ||| || ||| || ||||||| Sbjct 1452 AATCGGCGACGATCAGAAAATAGCCCGCATAGCCCAT 1488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160380879141252