Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq3137 120 1e-22 >seq3137 Length=6657 Score = 120 bits (132), Expect = 1e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 39081 GAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGAT 39140 ||| |||| || | ||||||| ||||| ||||| | ||| ||||| || ||||||| Sbjct 1273 GAAATCGACATCGAAATCGGGCAAGGAGATGCGCTCGGTGTTGAGGAAGCGTTCGAAGAG 1332 Query 39141 GAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCC 39200 | ||| | ||| || || ||| ||| || | |||||| ||| |||||||||| Sbjct 1333 CAAGTCGTAGTACAAGGGATCGAGATCGACGATGCCCAAGGCGTAGGCGACCAGCGAGCC 1392 Query 39201 AGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAA 39260 | | ||||| ||||| ||||| ||| | ||||| |||||||||||||| |||||| Sbjct 1393 GACGCCGGAGCCCCGCCCCGGGCCCACCGGAATGCCGTGCTCCTTCGCCCAGCGGATGAA 1452 Query 39261 GTCGGCGACGA 39271 |||||||||| Sbjct 1453 ATCGGCGACGA 1463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159689789112036