Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_028931.1 Length=55108 Score E Sequences producing significant alignments: (Bits) Value seq9923 86.0 2e-12 >seq9923 Length=1414 Score = 86.0 bits (94), Expect = 2e-12 Identities = 197/285 (69%), Gaps = 24/285 (8%) Strand=Plus/Plus Query 3996 GGGCGGCGGCATCGGCTACGACTTCTCCACCCTGCGCCCCAAGGGCGACCTGATCGTCA- 4054 |||| |||| ||||||||||| ||||| ||| || | |||| || | || || |||| Sbjct 1130 GGGCTGCGGGATCGGCTACGAGTTCTCGACCTTGAGGCCCAGCGGGG--CTTAT-GTCAC 1186 Query 4055 ---AGCTGCAGTCCCGCAGCTCCGGCCCCATCTCCTTCATGGAGATTTTCGA-CGCGGTC 4110 || | || || || ||||||||| |||| |||||||| || | ||| ||| Sbjct 1187 CGGCGCCGGAG-CCTACACCTCCGGCCCGCTCTCGTTCATGGATATCTACGATCGC---A 1242 Query 4111 TGCCGCTGCACG---TCCTCGTCCGGCCACCGCCGTGGCGCCCAGATGGGCGTCATGCG- 4166 || ||| |||| ||||| |||| ||||| || || ||||| |||| | | || Sbjct 1243 TG-TGCTTCACGGTCTCCTCCGCCGGAGGGCGCCGGGGAGCGCAGAT-GGCGACCTTCGA 1300 Query 4167 CATCGACCACCCCGACATCTTCGAGTTCATCCACGCCAAGC---AGAACGAGCACTTCCT 4223 ||| ||| ||||| || |||| ||||||| |||||||| | |||| | || | Sbjct 1301 TGTCGGCCATCCCGATATTCTCGATTTCATCCGCGCCAAGCGCGAAAACGGTCGCT---T 1357 Query 4224 GCGCGGCTTCAATATCTCCATCGCCGTCACCGACGAGTTCATGGA 4268 |||| |||||| |||| || ||||| | || |||||||| Sbjct 1358 GCGCCAGTTCAATCTCTCGCTCCTGATCACCCATGATTTCATGGA 1402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176195962541320