Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq97 131 2e-25 >seq97 Length=262405 Score = 131 bits (144), Expect = 2e-25 Identities = 201/287 (70%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 ||||| ||||| ||||| | |||||| || ||||| ||| |||| |||| |||||| | Sbjct 93739 TTATTCCCTCCTTGATCAACATATCTTGCTGTGTTGTTAAAAACCCTCAGCATTGGTACC 93680 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 | || ||||| || ||||| || |||| ||||||||| ||| | || || || | Sbjct 93679 AGGCCATTAGAAGTGCCATTGGTGCCAGCAATATAACTACCAGACGATCGTATCTTGTGA 93620 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 | | || || || || || || |||| ||||| || || | ||||| ||||| Sbjct 93619 ACAGCTAGACCAATACCCCCGGCACTCTTTGATATATTGGCACATCTCTTCAAGGTATCA 93560 Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392 || ||||||||||| ||| || ||| | || || |||||| || | ||| || Sbjct 93559 TATATACCCTCTATGGAGTCGTCGGCCATTGTGAGGAGGAAACAGGAGGAGAGCTGAGGA 93500 Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439 || ||| || | ||| || |||||||| || ||||| || ||||| Sbjct 93499 CGACAAGTACCAGAATTGAACAATGTCGGTGAAGCATGAGTGAACCA 93453 Score = 89.7 bits (98), Expect = 7e-13 Identities = 171/252 (68%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 77354 TGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413 ||| |||| ||| || ||||| |||||| | | || || |||||| ||| ||| Sbjct 111485 TGAGCCATGATAAGTCTCATACACTCCTTCCTCTCCCGCCAGCTCACAAGACGCAGTCAA 111426 Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATC 77473 ||| | ||||||||||| ||||| ||| || |||||| || || || || || ||| Sbjct 111425 AGCTGCATAATAAATTGTCTCGAATATCATCCGATTGAGCTCCTGAGCCTCTTCACAATC 111366 Query 77474 AAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 ||||| ||| | || ||||||| || || | || || || ||||||||||| || Sbjct 111365 AAACGAATACCTCATTAGGATAAAGGTGTCAGCGAGACCTTGTACCCCAATACCAATGGG 111306 Query 77534 TCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAAT 77593 | ||| | || || | ||| || || | || ||||| || ||||| || || Sbjct 111305 ACGATGGCGGAGGTTTGATGTCCGAGCCTCAGGTACTGGGTAATAGTTGATGTCAATGAT 111246 Query 77594 TTTATTGAGATT 77605 | ||||| || Sbjct 111245 CCTGTTGAGGTT 111234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694552460342720