Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq3137 116 1e-21 >seq3137 Length=6657 Score = 116 bits (128), Expect = 1e-21 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 40166 GAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGAT 40225 ||| |||| || | ||||||| ||| | |||||||| ||| ||||| || ||||||| Sbjct 1273 GAAATCGACATCGAAATCGGGCAAGGAGATGCGCTCGGTGTTGAGGAAGCGTTCGAAGAG 1332 Query 40226 GAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGCCGAGGCAGTAGGCGACCAGCGAACC 40285 | ||| | ||| || || || |||||| | | ||||||||||||||| || Sbjct 1333 CAAGTCGTAGTACAAGGGATCGAGATCGACGATGCCCAAGGCGTAGGCGACCAGCGAGCC 1392 Query 40286 GGCAGCCGAGCCACGTCCGGGTCCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAA 40345 | | | ||||| || || || || ||| | ||||| |||||| ||||||| |||||| Sbjct 1393 GACGCCGGAGCCCCGCCCCGGGCCCACCGGAATGCCGTGCTCCTTCGCCCAGCGGATGAA 1452 Query 40346 GTCGGCGACGACCAGGAAGTAG 40367 |||||||||| ||| || ||| Sbjct 1453 ATCGGCGACGATCAGAAAATAG 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160115321398544