Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq78 163 7e-35 seq89 93.3 1e-13 seq85 91.5 3e-13 >seq78 Length=312069 Score = 163 bits (180), Expect = 7e-35 Identities = 170/223 (76%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | ||| ||||||||||| |||||||||||||||||||||||||| | ||||| Sbjct 172481 CCTGAGGCGGAGAACAAGATGAAGTGTAGACTCTTTTTGGATGTTGTAATCAGACAAAGT 172422 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || || || || |||||||| | |||||| || | | ||||| Sbjct 172421 GCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCGGGTGGAATTCC 172362 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 |||||| |||||||| || ||| || | || | | | || ||| ||| |||||||| Sbjct 172361 TTCCTTGTCTTGAATCTTGGCTTTTACGTTTTCAATGGTATCGGAAGGCTCAACTTCAAG 172302 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||||| || || || || | |||||| || |||| |||||| Sbjct 172301 AGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCATT 172259 Score = 159 bits (176), Expect = 8e-34 Identities = 171/224 (76%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | ||| |||||||| || || || ||||| |||||||||||||| | ||||| Sbjct 172252 CTGAGGCGGAGAACAAGATGGAGTGTGGATTCTTTCTGGATGTTGTAATCAGACAAAGTG 172193 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | |||||||| || ||||| ||||| |||||||| | ||||||||| | | ||||| Sbjct 172192 CGGCCATCTTCAAGCTGCTTT--CCGGCAAAGATAAGACGCTGCTGGTCGGGTGGGATTC 172135 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 ||||||| || || || || ||||| |||| | |||| ||| ||| ||||||| Sbjct 172134 CTTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCAATAGTGTCAGAAGGCTCAACTTCAA 172075 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||| || || || || || || ||||||||||||| |||||| Sbjct 172074 GAGTGATGGTCTTTCCGGTAAGTGTCTTCACGAAGATTTGCATT 172031 Score = 158 bits (174), Expect = 3e-33 Identities = 171/225 (76%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | ||| |||||||| || ||||| || ||||||||||||||||||| | ||| Sbjct 172709 CCTGAGGCGGAGAACAAGATGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGT 172650 Query 151943 TCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000 | |||||||| | ||||| ||||| |||||||| | |||||| || | | |||| Sbjct 172649 ACGGCCATCTTCCAACTGCTTT--CCGGCAAAGATAAGACGCTGCTGATCGGGTGGGATT 172592 Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCA 152060 ||||| || ||||| ||||| ||| ||| | || | |||| ||| ||| |||||| Sbjct 172591 CCTTCTTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGCTCAACTTCA 172532 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || || || || || || ||||| ||||| | ||||||| Sbjct 172531 AGAGTGATGGTCTTTCCGGTAAGTGTCTTTACGAAAATCTGCATT 172487 Score = 154 bits (170), Expect = 3e-32 Identities = 169/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | ||| ||||||||||| |||||||| || || |||||||| |||| | ||| Sbjct 172025 CCTGAGGCGGAGAACAAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGAGT 171966 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || || || ||||||||||| | ||||||||| | | |||||| Sbjct 171965 ACGGCCATCTTCAAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGTGGGATTCC 171906 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 |||||| ||||| || || ||||| |||| | |||| ||| ||| |||||||| Sbjct 171905 TTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATTGTGTCAGAAGGCTCAACTTCAAG 171846 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || || || || || |||||||||| ||||| || Sbjct 171845 GGTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATTTGCATCTT 171801 Score = 143 bits (158), Expect = 6e-29 Identities = 168/225 (75%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||| ||||||||||| |||||||| ||||| |||||||| || | ||||| Sbjct 172937 CCTCAGGCGGAGAACAAGATGAAGTGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 172878 Query 151943 TCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000 | |||||||| | ||||| || || |||||||| | ||| || || | | |||| Sbjct 172877 ACGGCCATCTTCCAACTGCTTT--CCAGCAAAGATAAGACGCTGTTGATCAGGTGGGATT 172820 Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCA 152060 |||||||| || || || || |||||| |||| | | | || ||| ||| |||||| Sbjct 172819 CCTTCCTTGTCCTGGATCTTAGCCTTGACATTCTCAATGGTATCAGAAGGCTCAACTTCA 172760 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || || || || || || ||||| ||||| | ||||||| Sbjct 172759 AGAGTGATGGTCTTTCCGGTAAGTGTCTTTACGAAAATCTGCATT 172715 >seq89 Length=276290 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 151914 TCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAG 151973 || ||||| ||||| ||||| | | || | |||||||| | |||| || || || Sbjct 106570 TCCTTTTGAATGTTATAATCTGAGAGTGTACGACCATCTTCCAATATTTTACCAGCAAAT 106511 Query 151974 ATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTC 152033 || || ||||| || || | | ||||||||| || || || || ||| ||| ||| || Sbjct 106510 ATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTTATCCTGTATCTTTGCTTTAACATTC 106451 Query 152034 TCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACG 152093 || | | || ||| || |||||||||||||| ||||| || || ||||| || || Sbjct 106450 TCAATAGTATCAGAAGGTTCAACTTCAAGAGTAATTGTTTTACCAGTCAGAGTTTTTACA 106391 Query 152094 AAGACCTGCAT 152104 || | ||||| Sbjct 106390 AATATTTGCAT 106380 Score = 84.2 bits (92), Expect = 5e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 151914 TCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAG 151973 |||||||| ||||| ||||| | | || | |||||||| | | | || || || Sbjct 106342 TCTTTTTGAATGTTATAATCTGAGAGTGTACGACCATCTTCCAATTGTCTACCAGCAAAT 106283 Query 151974 ATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTC 152033 || || ||||| || || | | ||||||||| || || || || ||| ||| | | || Sbjct 106282 ATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTTATCCTGTATCTTTGCTTTAATATTC 106223 Query 152034 TCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACG 152093 || | | || ||| || |||||||||||||| ||||| || || ||||| || || Sbjct 106222 TCCATAGTATCAGAAGGTTCAACTTCAAGAGTAATTGTTTTACCAGTCAGAGTTTTTACA 106163 Query 152094 AAGACCTGCAT 152104 || | ||||| Sbjct 106162 AATATTTGCAT 106152 >seq85 Length=280044 Score = 91.5 bits (100), Expect = 3e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 |||| |||||||| ||||| | | |||| ||||| || | ||| || || |||| Sbjct 114614 CTTTCTGGATGTTATAATCAGAGAGGGTTCGACCATCCTCCAACTGTTTACCAGCAAAGA 114555 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | || | ||||||||| | | ||| |||||||| || || || || || ||| | | Sbjct 114554 TGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTT 114495 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 ||| | | || ||| ||| || || || || || || || || ||||||||||| || | Sbjct 114494 CTATGGTATCAGAAGGCTCGACCTCTAGCGTGATGGTCTTCCCAGTGAGAGTCTTGACAA 114435 Query 152095 AGACCTGCATTTT 152107 | | |||||| || Sbjct 114434 AAATCTGCATCTT 114422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153622732958058