Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq67 95.1 2e-14 >seq67 Length=335779 Score = 95.1 bits (104), Expect = 2e-14 Identities = 195/284 (69%), Gaps = 6/284 (2%) Strand=Plus/Minus Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACA-TAA 50532 ||| ||| |||| ||||| ||||| ||||||||| | || |||||||| | |||| | | Sbjct 317996 AGGTGATCTAGGTCCTGTCTACGGGTTTCAATGGCGCCACTTTGGAGCCCAATACAGTGA 317937 Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592 ||| | | ||||||| || ||||| || |||||| | | | ||| ||| Sbjct 317936 CATGC-ATTTTGATTACGATGGGCAAGGTGTAGATCAATTAGCTCAGGTCATACACACGA 317878 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | || || ||||| ||| ||||| ||||| |||| |||||||| |||||| Sbjct 317877 TAAAGACCAACCCGTCTTGTCGCCGTATCATAATGTCCGCATGGAATCCTGTGGATATAC 317818 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGT-CAATTTTATGCCACAGACAATGTT 50711 | | | | | | || ||||| |||| || ||| || ||||||| || || || Sbjct 317817 CTGAGATGGCTCTGCCCCCGTGCCATGCCTT-TGTGCAGTTTTATGTCAGTGATGGTGAG 317759 Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGG 50755 | || ||||| | ||||||||||||| ||||||| ||||| Sbjct 317758 CTCTCGTGTCAGTTGTATCAAAGATCAGGAGATATGG--TTAGG 317717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666963481580880