Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq170 104 2e-17 seq156 104 2e-17 >seq170 Length=1283570 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| || |||||||| ||||| ||| | || |||| ||||||||| || || Sbjct 1121683 TCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 1121742 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| ||| | | || ||||| |||||| ||| | || Sbjct 1121743 ATCAGACGCTGCTGGTCAGGGGGGATCCCTTCTTTGTCCTGTATCTTGGCCTTCACATTC 1121802 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | | ||| || || | ||||| || ||||| || || ||||||||| Sbjct 1121803 TCAATAGTGTCCGATGGTTCCACCTCAAGGGTGATTGTCTTGCCAGTAAGTGTTTTCACA 1121862 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 1121863 AAGATCTGCATC 1121874 >seq156 Length=1397929 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 || |||||||||||||| | || ||||||||| || ||||| || || || || Sbjct 357931 AGTCTCAGCACCAGGTGAAGTGTGGATTCTTTCTGGATATTGTAATCTGAGAGTGTGCGT 357872 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291 | || ||||||||||| || |||||||| | || |||||| ||| || | | ||| Sbjct 357871 CCATCTTCCAACTGCTTTCCAGCGAAAATCAACCTCTGCTGATCGGGCGGGATTCCCTCT 357812 Query 34292 TTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350 ||||| ||| |||||||| | | | || | || | || || || || | || Sbjct 357811 TTGTCCTGGATC-TTTGCTTTCACGTTTTCAATTGTGTCAGACGGCTCCACCTCAAGGGT 357753 Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||| ||||| |||||||| || || ||||||||||| Sbjct 357752 GATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 357714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323054943009920