Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq284 91.5 1e-13 >seq284 Length=917541 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 16625 TTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAttt 16684 ||||| || || |||||||||||||| |||||||| || || | ||| ||| || | | Sbjct 767113 TTTTCATTGACAATTCCATCGCTAGCAGCAAAAAAGGCCAGAACATGTGAAATGAAGTGT 767054 Query 16685 ttttCGTTATCTGAA---AGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCT 16741 || || | |||| || | | ||||| || || || ||||| || ||||| || Sbjct 767053 TTCTCTT---CTGACTTCAGCTCTTCCCAGTGAGCAAGGTCCTTTGACAAGTCGACTTCC 766997 Query 16742 TCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACA 16801 || ||||||||||||| || | || || || ||||||| ||| || || | || || Sbjct 766996 TCCGCAGTCCAAAAAGAGGCCTCTGCTTTCTTGTACATTTGCCAGATATCATGATACTCA 766937 Query 16802 ATAGGAAACACAACA 16816 || || || || ||| Sbjct 766936 ATTGGGAAGACCACA 766922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462486954975200