Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq284 96.9 5e-15 seq677 86.0 9e-12 seq88 86.0 9e-12 >seq284 Length=917541 Score = 96.9 bits (106), Expect = 5e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 50210 TTTCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269 |||| ||| |||||| | || || ||||| | || || |||||||| ||||| | Sbjct 767780 TTTCTTTAGGATCTTTGATGTATGTGTCGATGAGGAGGCTGTACATTTCACTGTGAATAT 767721 Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 50329 |||| || || ||||||||||||||||| || | ||||||||| | |||||| ||| | | Sbjct 767720 TTTCCATAGCAATCTGAAATCCGTAGAAGCAACGAGCCTCGGTGACCTGCACCTCTTTGC 767661 Query 50330 AAAATCGTTCA 50340 ||||||||| Sbjct 767660 TGAATCGTTCA 767650 >seq677 Length=433858 Score = 86.0 bits (94), Expect = 9e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || ||||| || ||||| ||||| | || || || || |||| |||||||||||| | | Sbjct 164093 TCAAACTCTTCCCCCCACACATCAGCCAAGCCTGGGCACTCGTGAGGACACATCAAAGTC 164034 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || ||||||| || | |||| ||| || | || || ||||| | || || Sbjct 164033 CAGTCTCCATTTTCTTCCACTCTGCGCATGAACAAGTCCGGGATCCACATGGCGTAGAAC 163974 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 | ||| |||| || |||||||| || || ||||| || || || | |||| | | Sbjct 163973 AAATCCCTGGCCCTCTGCTCCTCAGCACCAGTGTTCTTCTTCAGGTCCAAGAACTCAAAG 163914 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 || || | |||||| || |||| ||| | ||| Sbjct 163913 ATGTCGGCATGCCATGGCTCCAGGTAAACGGC 163882 >seq88 Length=1720321 Score = 86.0 bits (94), Expect = 9e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || ||||| || ||||| ||||| | || || || || |||| |||||||||||| | | Sbjct 1607720 TCAAACTCTTCCCCCCACACATCAGCCAAGCCTGGGCACTCGTGAGGACACATCAAAGTC 1607779 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || ||||||| || | |||| ||| || | || || ||||| | || || Sbjct 1607780 CAGTCTCCATTTTCTTCCACTCTGCGCATGAACAAGTCCGGGATCCACATGGCGTAGAAC 1607839 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 | ||| |||| || |||||||| || || ||||| || || || | |||| | | Sbjct 1607840 AAATCCCTGGCCCTCTGCTCCTCAGCACCAGTGTTCTTCTTCAGGTCCAAGAACTCAAAG 1607899 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 || || | |||||| || |||| ||| | ||| Sbjct 1607900 ATGTCGGCATGCCATGGCTCCAGGTAAACGGC 1607931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718229905744480