Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq284 96.9 5e-15 >seq284 Length=917541 Score = 96.9 bits (106), Expect = 5e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 42451 ATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 42510 |||||| || || ||||| || || || |||||||| |||| |||||| || || | Sbjct 767114 ATTTTCATTGACAATTCCATCGCTAGCAGCAAAAAAGGCCAGAACATGTGAAATGAAGTG 767055 Query 42511 TTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTC 42570 ||| || || | | | | | ||| | | | || || || | || ||||| || Sbjct 767054 TTTCTCTTCTGACTTCAGCTCTTCCCAGTGAGCAAGGTCCTTTGACAAGTCGACTTCCTC 766995 Query 42571 TACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAAT 42630 | |||||||| || || ||||| || || ||||| | ||||||||||||||| | ||| Sbjct 766994 CGCAGTCCAAAAAGAGGCCTCTGCTTTCTTGTACATTTGCCAGATATCATGATACTCAAT 766935 Query 42631 TGGGAAAATAACAAATCT 42648 |||||| | |||||||| Sbjct 766934 TGGGAAGACCACAAATCT 766917 Score = 96.9 bits (106), Expect = 5e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 42315 TTTCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGT 42374 |||| ||| |||||| | ||||| ||||| | || || |||||||| ||||| | Sbjct 767780 TTTCTTTAGGATCTTTGATGTATGTGTCGATGAGGAGGCTGTACATTTCACTGTGAATAT 767721 Query 42375 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTAC 42434 |||| || || ||||||||||||||||| || | |||||||| ||||| || ||| | | Sbjct 767720 TTTCCATAGCAATCTGAAATCCGTAGAAGCAACGAGCCTCGGTGACCTGCACCTCTTTGC 767661 Query 42435 AAAATCGTTCA 42445 ||||||||| Sbjct 767660 TGAATCGTTCA 767650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671102857812320