Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq284 87.8 3e-12 >seq284 Length=917541 Score = 87.8 bits (96), Expect = 3e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 125331 CTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGG 125390 || || ||||| ||||| || |||||| | | | ||||||| | |||| || | Sbjct 768794 CTGTTCAACGCCATCGAGACCTTGCCGTGTGTCAGAGAAAAGGCAGACTGGGCTATCAAG 768853 Query 125391 TGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAG 125450 ||||||| ||| || || | ||||| || | | || || || || || || || Sbjct 768854 TGGATCGGTGATGATTCTTCCCCCTACGCTGAGCGTGTTGTTGCTTTTGCTGCTGTTGAA 768913 Query 125451 GGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATG 125510 ||||||||||| || || || || || ||||| ||| | |||||| | ||| ||||| Sbjct 768914 GGCATCTTCTTCTCTGGCTCCTTCGCTGCAATCTTCTGGTTGAAGAAGAGGGGAATCATG 768973 Query 125511 CCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 || || || || |||||| ||| | || |||||||||| Sbjct 768974 CCTGGTCTCACATTCAGTAATGAGCTCATCAGCCGAGACGAGG 769016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741019071644320