Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq284 82.4 7e-11 >seq284 Length=917541 Score = 82.4 bits (90), Expect = 7e-11 Identities = 158/230 (69%), Gaps = 10/230 (4%) Strand=Plus/Minus Query 13541 TTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAtttt 13600 ||||| || || || || || |||||||||||||| || || | || ||| || | | Sbjct 767113 TTTTCATTGACAATTCCATCGCTAGCAGCAAAAAAGGCCAGAACATGTGAAATGAAGTGT 767054 Query 13601 ttttCGTTTTCTGAC---AACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCC 13657 || || ||||||| | || | ||| | | || || ||||| || || || ||| Sbjct 767053 TTCTC---TTCTGACTTCAGCTCTTCCCAGTGAGCAAGGTCCTTTGACAAGTCGACTTCC 766997 Query 13658 TCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACA 13717 || | ||||||||||| || | || ||||| ||||| ||| ||||| | ||| || Sbjct 766996 TCCGCAGTCCAAAAAGAGGCCTCTGCTTTCTTGTACATTTGCCAGATATCATGATACTCA 766937 Query 13718 ATGGGAAACACAACGTATCT--TCCAGTTGTCTGTCTTAAAATCGGTTCA 13765 || || || || || |||| | |||||| | ||| || ||||||| Sbjct 766936 ATTGGGAAGACCACAAATCTCCTGGGGTTGTC--TTTTAGAAGCGGTTCA 766889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430959645745464