Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq243 107 2e-18 >seq243 Length=1059084 Score = 107 bits (118), Expect = 2e-18 Identities = 130/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 5321 TCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAG 5380 || || || |||||||| || | ||| || || || ||| |||| || | |||| Sbjct 151656 TCACAAATAAGCTGAGCGATGCGGTCCCCTTTGTTGACCACAAACTCTTCCTCGGAGAAG 151597 Query 5381 TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACG 5440 || |||| || ||||||||||| || |||||||| | ||| ||||| || || || ||| Sbjct 151596 TTGAACATGACGACCCCGACATTCCCCCGGTAGTCCTGGTCAATAACCCCGGCACCGACG 151537 Query 5441 TCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACCA 5497 ||||| ||||||||| | || || || || || || || | || |||||||| ||| Sbjct 151536 TCGATGAAGTGTTTGGCAGCCAGTCCCGAGCGAGGCGCCACCCGGCCGTAGCAGCCA 151480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447726154315840