Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq412 91.5 8e-14 seq45 91.5 8e-14 seq650 84.2 1e-11 seq376 84.2 1e-11 >seq412 Length=739561 Score = 91.5 bits (100), Expect = 8e-14 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| |||||||| | || ||||||| ||| ||||||||||||||||||| Sbjct 665636 AAAAAATAGAATTGGCCAGTATGGGGGTCGAACCCATGACATTCGCGTTATTAGCACGAC 665695 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||||| |||||||||||||| ||||||| Sbjct 665696 GCTCTAACCAACTGAGCTAACCGGCCGTC 665724 >seq45 Length=2155702 Score = 91.5 bits (100), Expect = 8e-14 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | ||||||| || || ||||||| ||| ||||||||||||||||||| Sbjct 561902 AAAAAAACTGATTGGCCAATATGGGGGTCGAACCCATGACATTCGCGTTATTAGCACGAC 561843 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||||| |||||||||||||| ||||||| Sbjct 561842 GCTCTAACCAACTGAGCTAACCGGCCGTC 561814 Score = 87.8 bits (96), Expect = 9e-13 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||| | || |||||| | || ||||||| ||| |||||||||||||||| Sbjct 573195 AAAAAAAATTTAACTTGGCCAGTATGGGGGTCGAACCCATGACATTCGCGTTATTAGCAC 573136 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||||||| |||||||||||||| ||||||| Sbjct 573135 GACGCTCTAACCAACTGAGCTAACCGGCCGTC 573104 >seq650 Length=457830 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| ||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 36072 GGGTCGAACCCATGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 36013 Query 11528 CCGTC 11532 ||||| Sbjct 36012 CCGTC 36008 >seq376 Length=758891 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| ||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 731227 GGGTCGAACCCATGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 731286 Query 11528 CCGTC 11532 ||||| Sbjct 731287 CCGTC 731291 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261477394245232