Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq27 163 4e-36 >seq27 Length=2398530 Score = 163 bits (180), Expect = 4e-36 Identities = 182/243 (75%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| |||| | | | | ||||| ||||| || || |||||||| || || Sbjct 2324799 CGCCAAGCGTCACCGCAAAGTTTTGAGGGATAATATCCAGGGCATTACCAAGCCCGCCAT 2324858 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || |||||||| | |||||||| || |||||| | ||||| ||| |||| ||||||| Sbjct 2324859 TCGCCGTCTGGCCAGGCGTGGTGGTGTGAAGCGTATTTCTGGTTTGATCTACGAAGAGAC 2324918 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| | ||| | |||||| ||| || ||| ||||| || || ||||| Sbjct 2324919 CAGAGGTGTGCTCAAGGTATTCCTCGAGAATGTGATCAGGGATGCCGTCACTTACACCGA 2324978 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| || ||||| ||||| | |||||| | |||||||| | ||||||||||| Sbjct 2324979 GCACGCTAAGCGCAAGACCGTCACAGCTATGGATGTTGTCTATGCTCTCAAACGTCAAGG 2325038 Query 16672 CCG 16674 ||| Sbjct 2325039 CCG 2325041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79071239222076