Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq156 111 2e-19 >seq156 Length=1397929 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| || || | || || || | ||||| | ||| | || | Sbjct 358406 AATGCAGATTTTTGTGAAGACCCTCACAGGCAAGACTATCACATTGGAAGTGGAGCCGTC 358465 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| ||| | || ||| ||||| |||||||| || || || || ||||| Sbjct 358466 TGACACCATTGAGAATGTGAAAGCTAAGATCCAGGACAAAGAGGGAATCCCCCCAGATCA 358525 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || || || || | | ||||||||| || || |||| |||| | | ||||||||| Sbjct 358526 GCAGAGGCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCAGAACCTTGTCCGACTATAA 358585 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||| || |||||||| || ||||| |||| || ||||| |||||||| || Sbjct 358586 CATCCAGAAAGAATCCACACTCCATTTGGTGCTCAGACTCAGAGGAGGTAA 358636 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | ||||| ||| | ||||| | ||| | || || Sbjct 359987 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 360046 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | || || || || |||||||| || || ||||||||||| Sbjct 360047 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCCGATCAG 360106 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | || | | ||||||||| | ||||||| | | | | ||||| ||| Sbjct 360107 CAGAGATTGATCTTTGCCGGCAAACAGTTGGAAGATGGCCGTACCTTGTCGGACTACAAC 360166 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || ||||| || ||| ||||| |||| ||| | || |||||||| Sbjct 360167 ATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 360213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478636480431040