Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq677 131 4e-25 seq284 93.3 1e-13 >seq677 Length=433858 Score = 131 bits (144), Expect = 4e-25 Identities = 128/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || |||||| | |||| |||||||| || || |||| ||||||||||| || || ||| Sbjct 166274 GCCCAGAAGTTGTGGTACGCCATCATTGAGTCACAGACGGAGACAGGAACTCCGTACATG 166333 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 ||||||||||| || ||||| ||||||||||||||| |||| || || || || Sbjct 166334 TTGTACAAAGACAGCTGTAACCGAAAGTCCAACCAGCAGAACCTGGGCACCATCAAGTGT 166393 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 |||||| | || || |||||| | || ||||||||||| || ||| Sbjct 166394 AGCAACTTGTGCACAGAGATTGTGGAGTACACCGCTCCTGATGAG 166438 >seq284 Length=917541 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 22436 AGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCA---TTCGCGGAAC 22492 |||| |||||||| ||||| | || ||||| |||| ||| | ||| || | Sbjct 768829 AGAA-AAGGCAGACTGGGCTATCAAGTGGATCGGTGATGATTCTTCCCCCTACGCTGAGC 768887 Query 22493 GTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCT 22552 || || |||| ||||||| ||||||||||| ||||| ||||| | || |||||||| Sbjct 768888 GTGTTGTTGCTTTTGCTGCTGTTGAAGGCATCTTCTTCTCTGGCTCCTTCGCTGCAATCT 768947 Query 22553 TTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCC 22612 | ||| | || || | | ||| ||||| ||||| || || |||||| | || |||| Sbjct 768948 TCTGGTTGAAGAAGAGGGGAATCATGCCTGGTCTCACATTCAGTAATGAGCTCATCAGCC 769007 Query 22613 GAGATGAGG 22621 |||| |||| Sbjct 769008 GAGACGAGG 769016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303281258987624