Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq156 140 3e-28 seq170 122 8e-23 >seq156 Length=1397929 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || ||| ||||||| | ||||||||| | ||| Sbjct 359759 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTAGAAGTGGAGCCATCT 359818 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| |||||| |||||||| || ||||| || || || Sbjct 359819 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCCCCAGATCAG 359878 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || |||| |||||||||||||| | || |||| || || || || ||||| Sbjct 359879 CAACGTCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACAAC 359938 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| ||||| || ||||| ||||| | || |||||||| Sbjct 359939 ATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 359985 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || ||| ||||||| | ||||||||| | || Sbjct 359987 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 360046 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| |||||| |||||||| || ||||| || || || Sbjct 360047 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCCGATCAG 360106 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || |||||||||||||| || ||||||| || || || || ||||| Sbjct 360107 CAGAGATTGATCTTTGCCGGCAAACAGTTGGAAGATGGCCGTACCTTGTCGGACTACAAC 360166 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| ||||| || ||||| ||||| | || |||||||| Sbjct 360167 ATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 360213 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| | || || || | |||||| | ||||||||| |||| Sbjct 358406 AATGCAGATTTTTGTGAAGACCCTCACAGGCAAGACTATCACATTGGAAGTGGAGCCGTC 358465 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||| || ||| |||| || ||| |||||||| || || || || || || Sbjct 358466 TGACACCATTGAGAATGTGAAAGCTAAGATCCAGGACAAAGAGGGAATCCCCCCAGATCA 358525 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| |||||||||||||| | || |||| | || || ||| || || Sbjct 358526 GCAGAGGCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCAGAACCTTGTCCGACTATAA 358585 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 || || ||||||||||| || ||||| ||||| || || |||||||| || Sbjct 358586 CATCCAGAAAGAATCCACACTCCATTTGGTGCTCAGACTCAGAGGAGGTAA 358636 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || ||| ||||||| | ||||||||| | || Sbjct 359531 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 359590 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| |||||| |||||||| || ||||| || || || Sbjct 359591 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCAGATCAG 359650 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || |||||||||||||| | || |||| || || || || ||||| Sbjct 359651 CAGAGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACAAC 359710 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| ||||| || ||||| ||||| | || |||||||| Sbjct 359711 ATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 359757 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || ||| ||||||| | ||||||||| | || Sbjct 360215 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 360274 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| |||||| |||||||| || ||||| || || || Sbjct 360275 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCCCCAGATCAG 360334 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || |||| |||||||||||||| | || |||| || || || || ||||| Sbjct 360335 CAACGTCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACAAC 360394 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| ||||| || ||||| ||||| | || |||||||| Sbjct 360395 ATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 360441 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || ||| ||||||| | ||||||||| | ||| Sbjct 360443 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTAGAAGTGGAGCCATCT 360502 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| |||||| |||||||| || ||||| || || || Sbjct 360503 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCAGATCAG 360562 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || |||||||||||||| | || |||| || || || || ||||| Sbjct 360563 CAGAGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACAAC 360622 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| ||||| || ||||| ||||| | || |||||||| Sbjct 360623 ATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 360669 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || ||| ||||||| | ||||||||| | || Sbjct 360671 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 360730 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| |||||| |||||||| || ||||| || || || Sbjct 360731 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCCCCAGATCAG 360790 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || |||| |||||||||||||| | ||||||| || || || ||| ||||| Sbjct 360791 CAACGTCTTATCTTTGCCGGCAAACAGCTTGAAGATGGCCGTACCTTGTCCGACTACAAC 360850 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 || || ||||| || || || ||| |||| Sbjct 360851 ATCCAGAAAGAGTCAACCCTTCATCTAGT 360879 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || || || ||||||| | || |||||| ||||| Sbjct 357714 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTGGAGCCGTCT 357773 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || |||| ||| ||| |||||||| || || || || || || Sbjct 357774 GACACAATTGAAAACGTGAAAGCAAAGATCCAGGACAAAGAGGGAATCCCGCCCGATCAG 357833 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | ||||| || || || || || ||||||| ||||| | ||||||||| Sbjct 357834 CAGAGGTTGATTTTCGCTGGAAAGCAGTTGGAAGATGGACGCACACTCTCAGATTACAAT 357893 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||||||||| || || | ||||| || || || ||||| Sbjct 357894 ATCCAGAAAGAATCCACACTTCACCTGGTGCTGAGACTTAGGGGAGG 357940 >seq170 Length=1283570 Score = 122 bits (134), Expect = 8e-23 Identities = 167/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053 |||| ||||| || ||||| || || | || || || | ||||| | || ||||| Sbjct 1121878 AACAGATGCAGATCTTTGTGAAAACACTTACTGGCAAGACAATCACCCTTGAGGTGGAAC 1121819 Query 25054 CGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 | || |||||||| ||| ||||| || || |||||||||||||| || |||| Sbjct 1121818 CATCGGACACTATTGAGAATGTGAAGGCCAAGATACAGGACAAAGAAGGGATCCCCCCTG 1121759 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 |||| ||||| | || ||||| ||||| || | ||||||| |||||| || || | Sbjct 1121758 ACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTGTCAGACT 1121699 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||| || ||||| ||||| || ||| | ||||| | || ||||||| Sbjct 1121698 ACAATATCCAGAAAGAGTCCACCCTTCATCTTGTGCTTCGTCTCCGAGGAGG 1121647 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| || || ||||||||||| || | || ||||| ||||| || | ||||||| || Sbjct 1115151 AGGCATCCCCCCTGACCAACAACGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCG 1115092 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219 |||| || ||| |||||||| || ||||| ||||| || ||| | ||||| | || | Sbjct 1115091 CACTCTGTCCGACTACAATATCCAGAAAGAGTCCACCCTTCATCTTGTGCTTCGTCTCCG 1115032 Query 25220 AGGAGG 25225 |||||| Sbjct 1115031 AGGAGG 1115026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433305121906580