Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq156 100 2e-16 >seq156 Length=1397929 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || |||||||| || |||| ||||||||||| || ||||| ||| || Sbjct 360671 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 360730 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || || ||||| |||||||| || ||||| ||||| Sbjct 360731 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCCCCAGATCAG 360790 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | ||||| | ||| |||||||| | |||||| || || |||| || || Sbjct 360791 CAACGTCTTATCTTTGCCGGCAAACAGCTTGAAGATGGCCGTACCTTGTCCGACTACAAC 360850 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA 111416 || || ||||| || || || ||| |||| ||||||||||| ||||| || Sbjct 360851 ATCCAGAAAGAGTCAACCCTTCATCTAGTCTTGCGTCTGCGTGGTGGAAA 360900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423017665074400