Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq319 93.3 9e-14 seq10 93.3 9e-14 seq305 91.5 3e-13 seq2430 89.7 1e-12 seq1237 89.7 1e-12 seq834 89.7 1e-12 seq505 89.7 1e-12 seq174 89.7 1e-12 seq19 89.7 1e-12 seq536 86.0 1e-11 >seq319 Length=894722 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 374347 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 374406 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 374407 GCCCCACGTTGGGC 374420 >seq10 Length=3120666 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 1906629 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1906570 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 1906569 GCCCCACGTTGGGC 1906556 >seq305 Length=870114 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 211827 ATGGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 211768 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 211767 AGCCCCACGTTGGGC 211753 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 207163 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 207104 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 207103 CCCACGTTGGGC 207092 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 209318 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 209259 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 209258 CCCACGTTGGGC 209247 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 210542 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 210483 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 210482 CCCACGTTGGGC 210471 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 215569 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 215510 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 215509 CCCACGTTGGGC 215498 >seq2430 Length=8608 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 6194 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 6253 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 6254 CCCACGTTGGGC 6265 >seq1237 Length=149941 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 32404 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 32463 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 32464 CCCACGTTGGGC 32475 >seq834 Length=312861 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 196159 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 196100 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 196099 CCCACGTTGGGC 196088 >seq505 Length=598769 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 345571 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 345630 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 345631 CCCACGTTGGGC 345642 >seq174 Length=1294971 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 514230 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 514171 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 514170 CCCACGTTGGGC 514159 >seq19 Length=2758448 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2105581 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2105522 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2105521 CCCACGTTGGGC 2105510 >seq536 Length=563759 Score = 86.0 bits (94), Expect = 1e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 217813 GCTGGCACCAAAAACTCTGGTCTCTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCC 217872 || |||||||| ||||| | ||| ||||||||| |||| |||||||||||||| Sbjct 376144 GCCGGCACCAAGAACTCCAAACACTGTACTCTCATCTTGACCGAGGGAGACTCAGCCAAG 376203 Query 217873 ACGCTGGCAACCGCTGGTCTTGCCGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTC 217932 | |||| ||||| || | || ||||| || || |||| ||| | || ||||| Sbjct 376204 TCTTTGGCTGTGGCTGGGCTGGGAGTTGTGGGCCGAGATCGGTACGGTGTGTTTCCCCTT 376263 Query 217933 CGTGGTAAGCTGCTCAACGTGCGCGATGCC 217962 || ||||| || |||||||| || || ||| Sbjct 376264 CGAGGTAAACTACTCAACGTTCGAGAAGCC 376293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027779751203212