Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq156 179 7e-40 seq170 125 1e-23 seq284 96.9 6e-15 seq937 87.8 3e-12 >seq156 Length=1397929 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || |||| ||||| || || ||||||||||| |||||||| || || || Sbjct 360213 CCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGAC 360154 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| ||||| || ||||| || || | ||| || || ||||| ||| Sbjct 360153 AAGGTACGGCCATCTTCCAACTGTTTGCCGGCAAAGATCAATCTCTGCTGATCGGGAGGA 360094 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || |||||||| || || ||||| ||| ||| |||||||| | || || ||| Sbjct 360093 ATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACT 360034 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||||| || || |||||||||||||| |||||||| Sbjct 360033 TCCAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 359987 Score = 167 bits (184), Expect = 4e-36 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | ||| | || |||| ||| || ||||| ||||| ||||| || ||||| ||| Sbjct 357940 CCTCCCCTAAGTCTCAGCACCAGGTGAAGTGTGGATTCTTTCTGGATATTGTAATCTGAG 357881 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| |||||||| || ||||| || | || || || ||||| || Sbjct 357880 AGTGTGCGTCCATCTTCCAACTGCTTTCCAGCGAAAATCAACCTCTGCTGATCGGGCGGG 357821 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || ||||| || |||||||| || ||| || || ||||| | | || || Sbjct 357820 ATTCCCTCTTTGTCCTGGATCTTTGCTTTCACGTTTTCAATTGTGTCAGACGGCTCCACC 357761 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGC 68466 || | ||||||||| || || ||||| ||||||||||| |||||||| |||| Sbjct 357760 TCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATGATGC 357709 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || |||| ||||| || || ||||||||||| |||||||| || || || Sbjct 360441 CCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGAC 360382 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | ||| || ||||| || || || | ||| || || || ||| Sbjct 360381 AAGGTACGGCCATCCTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGA 360322 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || |||||||| || || ||||| ||| ||| |||||||| | || || ||| Sbjct 360321 ATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACT 360262 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||||| || || |||||||||||||| |||||||| Sbjct 360261 TCCAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 360215 Score = 167 bits (184), Expect = 4e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 ||||| || || || ||||| || | || || || |||||||| |||||||| || ||| Sbjct 360900 TTTCCACCACGCAGACGCAAGACTAGATGAAGGGTTGACTCTTTCTGGATGTTGTAGTCG 360841 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351 || | || | |||||||| | ||| || ||||| || || || | ||| || || || Sbjct 360840 GACAAGGTACGGCCATCTTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGG 360781 Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 ||||| || || |||||||| || || ||||| ||| ||| |||||||| | || || Sbjct 360780 GGAATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCC 360721 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||| ||||||||||| || || ||||||||||| || |||||||| Sbjct 360720 ACTTCCAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 360671 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || |||| ||||| || || ||||||||||| |||||||| || || || Sbjct 359757 CCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGAC 359698 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | ||| || ||||| || || | ||| || || || || ||| Sbjct 359697 AAGGTACGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGA 359638 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || |||||||| || || ||||| ||| ||| |||||||| | || || ||| Sbjct 359637 ATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACT 359578 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||||| || || ||||||||||| || |||||||| Sbjct 359577 TCCAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 359531 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || |||| ||||| || || ||||||||||| |||||||| || || || Sbjct 359985 CCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGAC 359926 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | ||| || ||||| || || || | ||| || || || ||| Sbjct 359925 AAGGTACGGCCATCCTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGA 359866 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || |||||||| || || ||||| ||| ||| |||||||| | || || ||| Sbjct 359865 ATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACT 359806 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||||| || || |||||||||||||| |||||||| Sbjct 359805 TCTAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 359759 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || |||| ||||| || || ||||||||||| |||||||| || || || Sbjct 360669 CCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGAC 360610 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | ||| || ||||| || || | ||| || || || || ||| Sbjct 360609 AAGGTACGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGA 360550 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || |||||||| || || ||||| ||| ||| |||||||| | || || ||| Sbjct 360549 ATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACT 360490 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||||| || || |||||||||||||| |||||||| Sbjct 360489 TCTAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 360443 Score = 145 bits (160), Expect = 1e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || ||||| ||||| ||||||||||| ||||| | || || ||||| || Sbjct 358615 ACCAAATGGAGTGTGGATTCTTTCTGGATGTTATAGTCGGACAAGGTTCTGCCATCCTCA 358556 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || ||||| || || || || || || || || || || || || ||||| || Sbjct 358555 AGCTGTTTGCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCCTCTTTGTCCTGG 358496 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| || || || ||| |||||||| | | || |||||||| ||||| || || Sbjct 358495 ATCTTAGCTTTCACATTCTCAATGGTGTCAGACGGCTCCACTTCCAATGTGATAGTCTTG 358436 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||||||||| || || ||||||||| Sbjct 358435 CCTGTGAGGGTCTTCACAAAAATCTGCATT 358406 >seq170 Length=1283570 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | || | || || ||||||||||| ||||| || || || || Sbjct 1121647 CCTCCTCGGAGACGAAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGAC 1121706 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || || || || | || ||||| || || Sbjct 1121707 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGG 1121766 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| ||||| || ||||| ||||| || ||| || ||||| | || ||| || Sbjct 1121767 ATCCCTTCTTTGTCCTGTATCTTGGCCTTCACATTCTCAATAGTGTCCGATGGTTCCACC 1121826 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || || || || || || |||||||| Sbjct 1121827 TCAAGGGTGATTGTCTTGCCAGTAAGTGTTTTCACAAAGATCTGCAT 1121873 Score = 96.9 bits (106), Expect = 6e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 68351 TGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTC 68410 || ||| ||||| |||||||||||||| ||||| || ||| |||||||||| | || Sbjct 1114914 TGCAATACCTTCTTTGTCTTGAATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTC 1114973 Query 68411 TACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| | |||||||| || || || |||||||| || || |||||||| Sbjct 1114974 TACTTCAAGTGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAAATCTGCAT 1115024 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||| ||||| ||||| || ||| |||||||||| | |||||| Sbjct 1113925 ATACCTTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCTACT 1113984 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || || |||||||| || || |||||||| Sbjct 1113985 TCAAGTGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAAATCTGCAT 1114031 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 ||||| |||||||||||||| ||||| || ||| ||||| |||| | |||||||| Sbjct 1120711 CCTTCTTTGTCTTGAATCTTGGCCTTCACATTCTCAATGGTATCTGAGGGCTCTACTTCA 1120770 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || || || |||||||| || || |||||||| Sbjct 1120771 AGGGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAAATCTGCAT 1120814 Score = 87.8 bits (96), Expect = 3e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 68351 TGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTC 68410 || ||| |||||||||||||||||||| || || || ||| || || |||| | || Sbjct 1118152 TGCAATACCTTCCTTGTCTTGAATCTTGGCTTTCACATTCTCAATAGTATCTGAAGGCTC 1118211 Query 68411 TACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| | |||||||| || || || |||||||| || || |||||||| Sbjct 1118212 TACTTCAAGTGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAAATCTGCAT 1118262 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | || | || || ||||||||||| ||||| || || ||||| Sbjct 1115026 CCTCCTCGGAGACGAAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCGGAC 1115085 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || || || || | ||||||||| || || Sbjct 1115086 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCAGGGGGG 1115145 Query 68355 ATGCCT 68360 |||||| Sbjct 1115146 ATGCCT 1115151 >seq284 Length=917541 Score = 96.9 bits (106), Expect = 6e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 9933 TTCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCC 9992 |||||||| ||| ||||||||||||| || || ||| |||||||||| ||||||| Sbjct 772205 TTCATGACTCCCATCTTCTGGTACTCCCCAACTCGTTTCTCAAAGAAGTTGGTCTTGCCC 772146 Query 9993 TCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 || | || || || ||||||||||||||||||||||| Sbjct 772145 TCCATTGAGATCAGTTCCATGAAGTCAAAGGGGTTCTC 772108 >seq937 Length=262530 Score = 87.8 bits (96), Expect = 3e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| ||||| ||||||||||||||||| || |||||||| | | ||| || Sbjct 206376 ATACCTTCTTTGTCCTGAATCTTTGCCTTGACATTTTCAATGGTGTCAGACGGTTCCACC 206317 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | |||||| || || || ||||| ||||| || || ||||||||| || Sbjct 206316 TCAAGGGTGATCGTCTTGCCTGTGAGTGTCTTCACAAAAATCTGCATTTTG 206266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921572494147040