Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq170 95.1 1e-14 seq769 89.7 4e-13 seq156 89.7 4e-13 >seq170 Length=1283570 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || || ||||| || || ||| || |||||| || || || ||| Sbjct 1121677 GTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 1121736 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| |||||||| ||||| || || || ||||||||||| ||||| || Sbjct 1121737 GCAAAGATCAGACGCTGCTGGTCAGGGGGGATCCCTTCTTTGTCCTGTATCTTGGCCTTC 1121796 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||| | | ||| || || | ||| | || ||||| || || ||| Sbjct 1121797 ACATTCTCAATAGTGTCCGATGGTTCCACCTCAAGGGTGATTGTCTTGCCAGTAAGTGTT 1121856 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 1121857 TTCACAAAGATCTGCAT 1121873 >seq769 Length=365539 Score = 89.7 bits (98), Expect = 4e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || || || | ||||| || |||||||||||||| || Sbjct 68587 ACCACCACGGAGTCTCAACACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAGTCTGA 68646 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| ||| ||||| || || ||||| | || | | ||| ||||| ||||| Sbjct 68647 CAACGTACGACCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGAGG 68706 Query 114275 AATGCCT 114281 ||||||| Sbjct 68707 AATGCCT 68713 >seq156 Length=1397929 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| || | ||||| | || ||||| | || |||||||| || ||||| || ||| Sbjct 358635 TACCTCCTCTGAGTCTGAGCACCAAATGGAGTGTGGATTCTTTCTGGATGTTATAGTCGG 358576 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 || || | ||| ||||| ||||| || || |||| || | ||| || || || | Sbjct 358575 ACAAGGTTCTGCCATCCTCAAGCTGTTTGCCGGCAAAGATAAGCCTCTGCTGATCTGGGG 358516 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 | || || |||||||| ||||| ||| | | |||| |||||| | | || | Sbjct 358515 GGATTCCCTCTTTGTCCTGGATCTTAGCTTTCACATTCTCAATGGTGTCAGACGGCTCCA 358456 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | |||| || | || ||||| || || || || |||||||||||||| Sbjct 358455 CTTCCAATGTGATAGTCTTGCCTGTGAGGGTCTTCACAAAAATCTGCAT 358407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420112218479184