Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq156 122 9e-23 seq170 114 1e-20 seq677 98.7 1e-15 seq88 98.7 1e-15 seq769 89.7 5e-13 >seq156 Length=1397929 Score = 122 bits (134), Expect = 9e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | ||| | || || ||||| || |||||||| || | | ||| || | || Sbjct 360654 AGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCATCC 360595 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||| ||||||||| | || | | |||||| || ||||||||||| ||||| ||| Sbjct 360594 TCAAGCTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCT 360535 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| || ||| | || ||| | |||||||||| ||| | ||| Sbjct 360534 TGGATTTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACTTCTAGAGTGATGGTT 360475 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| |||| || || ||||| || ||||| Sbjct 360474 TTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 360443 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||||||||| || || ||||| || |||||||| || | | ||| || | |||||| Sbjct 360879 ACTAGATGAAGGGTTGACTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCTTCA 360820 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 ||||| ||||||||| | || || || ||||| || || |||||||| ||||| ||||| Sbjct 360819 AGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTGTCTTGG 360760 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 ||||| ||| || ||| | || || | |||||||| | ||| | ||| ||| Sbjct 360759 ATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTTTTG 360700 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || |||| || || || || || ||||| Sbjct 360699 CCAGTCAGGGTCTTGACAAAGATCTGCAT 360671 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | ||| | || || ||||| || |||||||| || | | ||| || | ||| Sbjct 360198 AGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCATCT 360139 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||| ||||||||| | || | | |||||| |||||||||||||| ||||| ||| Sbjct 360138 TCCAACTGTTTGCCGGCAAAGATCAATCTCTGCTGATCGGGAGGAATTCCCTCTTTGTCT 360079 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| || ||| | || || | |||||||| | ||| | ||| Sbjct 360078 TGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTT 360019 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| |||| || || ||||| || ||||| Sbjct 360018 TTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 359987 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | ||| | || || ||||| || |||||||| || | | ||| || | || Sbjct 359742 AGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCATCC 359683 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||| ||||||||| | || | | |||||| || ||||||||||| ||||| ||| Sbjct 359682 TCAAGCTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCT 359623 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| || ||| | || || | |||||||| | ||| | ||| Sbjct 359622 TGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTT 359563 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| |||| || || || || || ||||| Sbjct 359562 TTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 359531 >seq170 Length=1283570 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| ||||||| || || ||||| || || ||||| |||| | ||||| | || Sbjct 1121661 AAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATC 1121720 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||||||||| ||| | || || ||||||||||| || || || |||||||| || Sbjct 1121721 TTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATCCCTTCTTTGTC 1121780 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||||| || ||| ||| ||| | || || | ||||| || | || | || Sbjct 1121781 CTGTATCTTGGCCTTCACATTCTCAATAGTGTCCGATGGTTCCACCTCAAGGGTGATTGT 1121840 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | ||||| || || || ||||| Sbjct 1121841 CTTGCCAGTAAGTGTTTTCACAAAGATCTGCAT 1121873 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| ||||||| || || ||||| || || ||||| |||| | ||||| | || Sbjct 1111803 AAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATC 1111862 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342 ||| ||||||||||| ||| |||| || ||||||||||| || || |||||| Sbjct 1111863 TTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGGGGGATTCCT 1111914 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| ||||||| || || ||||| || || ||||| |||| | ||||| | || Sbjct 1114047 AAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATC 1114106 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342 ||| ||||||||||| ||| | || || ||||||||||| || || |||||| Sbjct 1114107 TTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATTCCT 1114158 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| ||||||| || || ||||| || || ||||| |||| | ||||| | || Sbjct 1117510 AAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATC 1117569 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342 ||| ||||||||||| ||| | || || ||||||||||| || || |||||| Sbjct 1117570 TTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATTCCT 1117621 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| ||||||| || || ||||| || || ||||| |||| | ||||| | || Sbjct 1120830 AAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATC 1120889 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342 ||| ||||||||||| ||| | || || ||||||||||| || || |||||| Sbjct 1120890 TTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATTCCT 1120941 >seq677 Length=433858 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 154814 TTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGG 154873 ||| |||||||| ||||||||| | |||| || | ||| || || || || || Sbjct 164106 TTCATACAGTTTGTCAAACTCTTCCCCCCACACATCAGCCAAGCCTGGGCACTCGTGAGG 164047 Query 154874 ACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCA 154933 ||||||||| | ||| | | |||| || || | ||| ||||| ||||| | ||| Sbjct 164046 ACACATCAAAGTCCAGTCTCCATTTTCTTCCACTCTGCGCATGAACAAGTCCGGGATCCA 163987 Query 154934 CAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATT 154993 || ||||| |||||||| | ||| | | || ||||| || |||| ||| | | Sbjct 163986 CATGGCGTAGAACAAATCCCTGGCCCTCTGCTCCTCAGCACCAGTGTTCTTCTTCAGGTC 163927 Query 154994 CAAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCC 155047 ||| || ||| | |||||||| ||||| ||||| | || ||||| | ||| || Sbjct 163926 CAAGAACTCAAAGATGTCGGCATGCCATGGCTCCAGGTAAACGGCAAACGCTCC 163873 >seq88 Length=1720321 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 154814 TTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGG 154873 ||| |||||||| ||||||||| | |||| || | ||| || || || || || Sbjct 1607707 TTCATACAGTTTGTCAAACTCTTCCCCCCACACATCAGCCAAGCCTGGGCACTCGTGAGG 1607766 Query 154874 ACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCA 154933 ||||||||| | ||| | | |||| || || | ||| ||||| ||||| | ||| Sbjct 1607767 ACACATCAAAGTCCAGTCTCCATTTTCTTCCACTCTGCGCATGAACAAGTCCGGGATCCA 1607826 Query 154934 CAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATT 154993 || ||||| |||||||| | ||| | | || ||||| || |||| ||| | | Sbjct 1607827 CATGGCGTAGAACAAATCCCTGGCCCTCTGCTCCTCAGCACCAGTGTTCTTCTTCAGGTC 1607886 Query 154994 CAAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCC 155047 ||| || ||| | |||||||| ||||| ||||| | || ||||| | ||| || Sbjct 1607887 CAAGAACTCAAAGATGTCGGCATGCCATGGCTCCAGGTAAACGGCAAACGCTCC 1607940 >seq769 Length=365539 Score = 89.7 bits (98), Expect = 5e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| | ||| | |||| || || || |||||||||||||| |||| Sbjct 68587 ACCACCACGGAGTCTCAACACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAGTCTGA 68646 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || |||||||||||||| ||| |||| | || ||||||||| ||||| Sbjct 68647 CAACGTACGACCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGAGG 68706 Query 64336 AATTCCT 64342 ||| ||| Sbjct 68707 AATGCCT 68713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499617744234080