Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq170 134 3e-26 seq156 118 2e-21 >seq170 Length=1283570 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || ||||| || |||| |||||||| | || ||| | |||||| Sbjct 1121662 AGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCT 1121721 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || ||||| |||||||||||||| || || |||||| ||| Sbjct 1121722 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATCCCTTCTTTGTCC 1121781 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | ||||| | || ||| || || | ||||| ||| Sbjct 1121782 TGTATCTTGGCCTTCACATTCTCAATAGTGTCCGATGGTTCCACCTCAAGGGTGATTGTC 1121841 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||||||||| || || Sbjct 1121842 TTGCCAGTAAGTGTTTTCACAAAGATCTG 1121870 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || ||||| || |||| |||||||| | || ||| | |||||| Sbjct 1114048 AGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCT 1114107 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||| || || ||||| |||||||||||||| || Sbjct 1114108 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGG 1114148 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || ||||| || |||| |||||||| | || ||| | |||||| Sbjct 1117511 AGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCT 1117570 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||| || || ||||| |||||||||||||| || Sbjct 1117571 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGG 1117611 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || ||||| || |||| |||||||| | || ||| | |||||| Sbjct 1120831 AGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCT 1120890 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||| || || ||||| |||||||||||||| || Sbjct 1120891 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGG 1120931 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || ||||| || |||| |||||||| | || ||| | |||||| Sbjct 1111804 AGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCT 1111863 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||| || || || || |||||||||||||| || Sbjct 1111864 TCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGG 1111904 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || ||||| || |||| |||||||| | || ||| | |||||| Sbjct 1118279 AGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCT 1118338 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||| || || ||||| ||||||||||| || || Sbjct 1118339 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGG 1118379 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || ||||| || |||| |||||||| | || ||| | |||||| Sbjct 1115041 AGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCGGACAGAGTGCGGCCATCT 1115100 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||| || || ||||| ||||| || ||||| || Sbjct 1115101 TCCAGCTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCAGG 1115141 >seq156 Length=1397929 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || || | ||||| || || || || |||| ||| ||||| | ||| || || Sbjct 358624 AGTCTGAGCACCAAATGGAGTGTGGATTCTTTCTGGATGTTATAGTCGGACAAGGTTCTG 358565 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| || ||||| || ||||| ||||| || | |||||| || || ||||| ||| Sbjct 358564 CCATCCTCAAGCTGTTTGCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCCTCT 358505 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||||| || | |||||| | | || || ||||| ||| Sbjct 358504 TTGTCCTGGATCTTAGCTTTCACATTCTCAATGGTGTCAGACGGCTCCACTTCCAATGTG 358445 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || ||||| || ||||||||||| || Sbjct 358444 ATAGTCTTGCCTGTGAGGGTCTTCACAAAAATCTG 358410 Score = 111 bits (122), Expect = 4e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 ||||||||| || ||||| || || || || || |||| ||||| || | | || | Sbjct 357932 AAGTCTCAGCACCAGGTGAAGTGTGGATTCTTTCTGGATATTGTAATCTGAGAGTGTGCG 357873 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||||||||| ||||||||| ||||| || | | |||||| || || ||||| || Sbjct 357872 TCCATCTTCCAACTGCTTTCCAGCGAAAATCAACCTCTGCTGATCGGGCGGGATTCCCTC 357813 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 | ||||| |||||| |||||| ||| | ||||| | | || || || | || Sbjct 357812 TTTGTCCTGGATCTTTGCTTTCACGTTTTCAATTGTGTCAGACGGCTCCACCTCAAGGGT 357753 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || |||||||| || || || || || Sbjct 357752 GATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTG 357717 Score = 86.0 bits (94), Expect = 1e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || ||||| ||||||||||||||||||||| | || | | |||||||| |||||||| Sbjct 357843 ATTTTCGCTGGAAAGCAGTTGGAAGATGGACGCACACTCTCAGATTACAATATCCAGAAA 357902 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTT 201027 || || || |||||||| || |||||||| Sbjct 357903 GAATCCACACTTCACCTGGTGCTGAGACTT 357932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178856165430244