Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq170 120 3e-22 seq156 114 1e-20 >seq170 Length=1283570 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||| | ||| ||||| | || ||| || |||||||||||||| | Sbjct 1121645 TGCCTCCTCGGAGACGAAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTG 1121704 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||||| | || || ||||||||||| || || |||| ||||||||||| | | Sbjct 1121705 ACAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGG 1121764 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | || |||||| ||||| ||| | || | | ||||| | ||||| Sbjct 1121765 GGATCCCTTCTTTGTCCTGTATCTTGGCCTTCACATTCTCAATAGTGTCCGATGGTTCCA 1121824 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | ||||| || ||||| || || ||||| |||||||| ||||| Sbjct 1121825 CCTCAAGGGTGATTGTCTTGCCAGTAAGTGTTTTCACAAAGATCTGCAT 1121873 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||| | ||| ||||| | || ||| || |||||||||||||| | Sbjct 1114031 TGCCTCCTCGGAGACGAAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTG 1114090 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 | |||||||| | || || ||||||||||| || || |||| ||||||||||| Sbjct 1114091 ACAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTC 1114145 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||| | ||| ||||| | || ||| || |||||||||||||| | Sbjct 1117494 TGCCTCCTCGGAGACGAAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTG 1117553 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 | |||||||| | || || ||||||||||| || || |||| ||||||||||| Sbjct 1117554 ACAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTC 1117608 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||| | ||| ||||| | || ||| || |||||||||||||| | Sbjct 1120814 TGCCTCCTCGGAGACGAAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTG 1120873 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 | |||||||| | || || ||||||||||| || || |||| ||||||||||| Sbjct 1120874 ACAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTC 1120928 Score = 86.0 bits (94), Expect = 7e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | ||| ||||| | || ||| || |||||||||||||| | Sbjct 1111787 TGCCTCCCCGGAGACGAAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTG 1111846 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 | |||||||| | || || ||||||||||| || || |||| ||||||||||| Sbjct 1111847 ACAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTC 1111901 Score = 86.0 bits (94), Expect = 7e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||| | ||| ||||| | || ||| || |||||||||||||||| Sbjct 1115024 TGCCTCCTCGGAGACGAAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCGG 1115083 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 | |||||||| | || || ||||||||||| || || |||| || || ||||| Sbjct 1115084 ACAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGTTGTTGGTC 1115138 Score = 86.0 bits (94), Expect = 7e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||| | ||| ||||| | || ||| || |||||||||||||| | Sbjct 1118262 TGCCTCCTCGGAGACGAAGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTG 1118321 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 | |||||||| | || || ||||||||||| || || |||| |||||||| || Sbjct 1118322 ACAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATC 1118376 >seq156 Length=1397929 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | ||||| ||||| ||| | || ||| || ||||| |||||||| || Sbjct 359757 CCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGAC 359698 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || || | || || ||||| |||||||| || ||||| | |||||| || | || Sbjct 359697 AAGGTACGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGA 359638 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCC 46543 | | ||| ||||| ||| || ||| | || | | ||||| |||| ||| Sbjct 359637 ATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTC---CGATGGCTCC 359581 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| |||||||||||||| ||||| || || |||||||| ||||| Sbjct 359580 ACTTCCAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 359531 Score = 109 bits (120), Expect = 6e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | ||||| ||||| ||| | || ||| || ||||| |||||||| || Sbjct 360213 CCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGAC 360154 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || || | || || | ||| |||||||| || ||||| | |||||| |||| || Sbjct 360153 AAGGTACGGCCATCTTCCAACTGTTTGCCGGCAAAGATCAATCTCTGCTGATCGGGAGGA 360094 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCC 46543 | | ||| ||||| ||| || ||| | || | | ||||| |||| ||| Sbjct 360093 ATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTC---CGATGGCTCC 360037 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| |||||||||||||| ||||| || || || ||||| ||||| Sbjct 360036 ACTTCCAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 359987 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | ||||| ||||| ||| | || ||| || ||||| |||||||| || Sbjct 360669 CCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGAC 360610 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || || | || || ||||| |||||||| || ||||| | |||||| || | || Sbjct 360609 AAGGTACGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGA 360550 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| ||| || ||| | || | | ||||| | ||||| Sbjct 360549 ATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACT 360490 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||||||||| ||||| || || || ||||| ||||| Sbjct 360489 TCTAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 360443 Score = 102 bits (112), Expect = 9e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | | || |||||| || | ||| || || ||||||||||| || || Sbjct 357940 CCTCCCCTAAGTCTCAGCACCAGGTGAAGTGTGGATTCTTTCTGGATATTGTAATCTGAG 357881 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || | |||||| || ||||| ||||| | |||||| |||| ||| Sbjct 357880 AGTGTGCGTCCATCTTCCAACTGCTTTCCAGCGAAAATCAACCTCTGCTGATCGGGCGGG 357821 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCG-TCGCCACCGTGTCGCTCGATTCCAC 46545 | | ||| |||||| |||||| | ||| || | | | ||||| || ||||| Sbjct 357820 ATTCCCTCTTTGTCCTGGATCTT-TGCTTTCACGTTTTCAATTGTGTCAGACGGCTCCAC 357762 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| ||||| || || || || || ||||| ||||| Sbjct 357761 CTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 357714 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | ||||| ||||| ||| | || ||| || ||||| |||||||| || Sbjct 360441 CCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGAC 360382 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || || | || || ||||| |||||||| || || | || ||||| || | || Sbjct 360381 AAGGTACGGCCATCCTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGA 360322 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCC 46543 | | ||| ||||| ||| || ||| | || | | ||||| |||| ||| Sbjct 360321 ATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTC---CGATGGCTCC 360265 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| |||||||||||||| ||||| || || || ||||| ||||| Sbjct 360264 ACTTCCAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 360215 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| || ||||| | || ||| || ||||| ||||||||||| | || || | Sbjct 360886 ACGCAAGACTAGATGAAGGGTTGACTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCC 360827 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||| |||||||| || || | || ||||| || | || | | ||| || Sbjct 360826 ATCTTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTT 360767 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCCACCGT 46554 ||| ||| || ||| | || | | ||||| |||| ||||| |||| || Sbjct 360766 GTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTC---CGATGGCTCCACTTCCAGAGT 360710 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||||||| ||||| || || |||||||| ||||| Sbjct 360709 GATGGTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 360671 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | ||||| ||||| ||| | || ||| || ||||| |||||||| || Sbjct 359985 CCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGAC 359926 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || || | || || ||||| |||||||| || || | || ||||| || | || Sbjct 359925 AAGGTACGGCCATCCTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGA 359866 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| ||| || ||| | || | | ||||| | ||||| Sbjct 359865 ATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACT 359806 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||||||||| ||||| || || || ||||| ||||| Sbjct 359805 TCTAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 359759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565207792340640