Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq156 138 1e-27 seq284 102 8e-17 >seq156 Length=1397929 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || |||||||||||||| | || || ||| | | Sbjct 359759 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTAGAAGTGGAGCCATCT 359818 Query 38304 GACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | ||||||| |||||||||||||||||| | || || Sbjct 359819 GACACCATTGAGAACG-TGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCCCCAGATCA 359877 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | || ||||||||||| || || | || ||| | |||||||| Sbjct 359878 GCAACGTCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACAA 359937 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || | || || ||||||||||||||| ||||||| || Sbjct 359938 CATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 359985 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || |||||||||||||| | || || ||| | | Sbjct 360215 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 360274 Query 38304 GACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | ||||||| |||||||||||||||||| | || || Sbjct 360275 GACACCATTGAGAACG-TGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCCCCAGATCA 360333 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | || ||||||||||| || || | || ||| | |||||||| Sbjct 360334 GCAACGTCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACAA 360393 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || | || || ||||||||||||||| ||||||| || Sbjct 360394 CATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 360441 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || |||||||||||||| | || || ||| | | Sbjct 359987 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 360046 Query 38304 GACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | ||||||| ||||||||||||||||| |||| || Sbjct 360047 GACACCATTGAGAACG-TGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCCGATCA 360105 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | || ||||||||| |||| || | || ||| | |||||||| Sbjct 360106 GCAGAGATTGATCTTTGCCGGCAAACAGTTGGAAGATGGCCGTACCTTGTCGGACTACAA 360165 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || | || || ||||||||||||||| ||||||| || Sbjct 360166 CATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 360213 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || |||||||||||||| | || || ||| | | Sbjct 360443 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTAGAAGTGGAGCCATCT 360502 Query 38304 GACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | ||||||| ||||||||||||||||| | || || Sbjct 360503 GACACCATTGAGAACG-TGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCAGATCA 360561 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | || ||||||||||| || || | || ||| | |||||||| Sbjct 360562 GCAGAGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACAA 360621 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || | || || ||||||||||||||| ||||||| || Sbjct 360622 CATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 360669 Score = 127 bits (140), Expect = 2e-24 Identities = 173/239 (72%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 38233 TCTTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACG 38292 |||||| | ||||| || || || || || || || |||||||||||||| | || | Sbjct 359520 TCTTTACAGGTATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAG 359579 Query 38293 TCGAGGCCACCGACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATT 38351 | ||| | | |||| | || |||| | || | ||||||| ||||||||||||||| Sbjct 359580 TGGAGCCATCGGACACCATTGAGAACG-TGAAGGCCAAAATCCAAGACAAAGAGGGAATT 359638 Query 38352 CCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTC 38411 || | || || ||| | | || | || ||||||||||| || || | || ||| | Sbjct 359639 CCTCCAGATCAGCAGAGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTG 359698 Query 38412 AACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||||| || || | || || ||||||||||||||| ||||||| || Sbjct 359699 TCGGACTACAACATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 359757 Score = 122 bits (134), Expect = 9e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| | | Sbjct 357714 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTGGAGCCGTCT 357773 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||||| | |||| ||| |||| |||||||||||||| || |||| || Sbjct 357774 GACACAATTGAAAACG-TGAAAGCAAAGATCCAGGACAAAGAGGGAATCCCGCCCGATCA 357832 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | |||| ||| || || ||| |||| || | ||||| ||| || ||||| Sbjct 357833 GCAGAGGTTGATTTTCGCTGGAAAGCAGTTGGAAGATGGACGCACACTCTCAGATTACAA 357892 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 ||||| || ||| | || || || |||||||| Sbjct 357893 TATCCAGAAAGAATCCACACTTCACCTGGTGCTG 357926 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || |||||||||||||| | || || ||| | | Sbjct 360671 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 360730 Query 38304 GACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | ||||||| |||||||||||||||||| | || || Sbjct 360731 GACACCATTGAGAACG-TGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCCCCAGATCA 360789 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | || ||||||||||| || || | || ||| | ||||||||| Sbjct 360790 GCAACGTCTTATCTTTGCCGGCAAACAGCTTGAAGATGGCCGTACCTTGTCCGACTACAA 360849 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || | || || ||| | || ||||| || | || || Sbjct 360850 CATCCAGAAAGAGTCAACCCTTCATCTAGTCTTGCGTCTGCGTGGTGG 360897 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || ||||| ||||| || ||||| | || || ||| | | Sbjct 358406 AATGCAGATTTTTGTGAAGACCCTCACAGGCAAGACTATCACATTGGAAGTGGAGCCGTC 358465 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | | |||| || |||| |||||||||||||| ||| | || || Sbjct 358466 TGACACCATTGAGAATGTGAAAGCTAAGATCCAGGACAAAGAGGGAATCCCCCCAGATCA 358525 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || ||||||||||| || || | | ||| | |||||| || Sbjct 358526 GCAGAGGCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCAGAACCTTGTCCGACTATAA 358585 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| || ||| | || || ||||||||||| Sbjct 358586 CATCCAGAAAGAATCCACACTCCATTTGGTGCT 358618 >seq284 Length=917541 Score = 102 bits (112), Expect = 8e-17 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Minus Query 133275 CTCG-ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCT 133333 |||| ||||||||||| ||||| || || ||||| || || ||||||||||| || || Sbjct 767124 CTCGTACCAGATTTTCATTGACAATTCCATCGCTAGCAGCAAAAAAGGCCAGAACATGTG 767065 Query 133334 TGATGAAATGGCGCTCGT-TGTCGTTCAAGCGC-TCCCAGTCGCGC-GTGTCCTTGGACA 133390 ||||| || ||| | || | ||| ||| | ||||||| | || |||||| |||| Sbjct 767064 AAATGAAGTGTTTCTCTTCTGAC-TTC-AGCTCTTCCCAGT-GAGCAAGGTCCTTTGACA 767008 Query 133391 GGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGT 133450 ||| || ||||| | |||||||| || ||||| ||||| |||||||| ||| || | Sbjct 767007 AGTCGACTTCCTCCGCAGTCCAAAAAGAGGCCTCTGCTTTCTTGTACATTTGCCAGATAT 766948 Query 133451 CCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493 | ||| | || || || | |||||| | | |||||| || Sbjct 766947 CATGATACTCAATTGGGAAGACCACAAATCTCCTGGGGTTGTC 766905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500145715642880