Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq156 104 9e-17 >seq156 Length=1397929 Score = 104 bits (114), Expect = 9e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||||||| ||||| || ||||| || || || ||||| Sbjct 360443 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTAGAAGTGGAGCCATCT 360502 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || ||||| ||||| || || ||||||||||| ||||| Sbjct 360503 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCAGATCAG 360562 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || ||||| ||||| ||||| | || ||| |||| || || Sbjct 360563 CAGAGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACAAC 360622 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | || || | || || || || || | | ||||||||| Sbjct 360623 ATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGA 360667 Score = 104 bits (114), Expect = 9e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || |||||||| ||||| || ||||| || || || |||| Sbjct 360671 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 360730 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || ||||| ||||| || || |||||||| || ||||| Sbjct 360731 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCCCCAGATCAG 360790 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || ||||| ||||||||||| | || ||| | || || || Sbjct 360791 CAACGTCTTATCTTTGCCGGCAAACAGCTTGAAGATGGCCGTACCTTGTCCGACTACAAC 360850 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | || || |||| ||||| |||| || Sbjct 360851 ATCCAGAAAGAGTCAACCCTTCATCTAGTCTT 360882 Score = 95.1 bits (104), Expect = 5e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || |||||||| ||||| || ||||| || || || |||| Sbjct 359531 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 359590 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || ||||| ||||| || || ||||||||||| ||||| Sbjct 359591 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCAGATCAG 359650 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || ||||| ||||| ||||| | || ||| |||| || || Sbjct 359651 CAGAGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACAAC 359710 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | || || | || || || || || | | ||||||||| Sbjct 359711 ATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGA 359755 Score = 95.1 bits (104), Expect = 5e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||||||| ||||| || ||||| || || || |||| Sbjct 359987 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGTGGAGCCATCG 360046 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || ||||| ||||| || || ||||||||||| ||||| Sbjct 360047 GACACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCCGATCAG 360106 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || ||||| | |||||||| | || ||| |||| || || Sbjct 360107 CAGAGATTGATCTTTGCCGGCAAACAGTTGGAAGATGGCCGTACCTTGTCGGACTACAAC 360166 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | || || | || || || || || | | ||||||||| Sbjct 360167 ATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGA 360211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975608740219856