Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq243 86.0 8e-12 >seq243 Length=1059084 Score = 86.0 bits (94), Expect = 8e-12 Identities = 178/258 (69%), Gaps = 8/258 (3%) Strand=Plus/Plus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 ||| || || || ||||| || || || || |||| |||||| ||| | || ||||| Sbjct 151486 CTACGGCCGGGTGGCGCCTCGCTCGGGACTGGCTGCCAAACACTTCATCGACGTCGGTGC 151545 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAA-GTCAAAGTCGTTCTCTTCAA--TCATGG 163662 || |||||||| | |||||| |||| ||| ||| ||||| | ||||| || | Sbjct 151546 CGGGGTTATTGACCAGGACTAC-CGGGGGAATGTCGGGGTCGTCATGTTCAACTTCTCCG 151604 Query 163663 AGACAAAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTGAGAGGTG 163722 || |||| |||| ||| || | ||||| |||||||| || ||| || ||||||| Sbjct 151605 AGG--AAGAGTTTGTGGTCAACAAAGGGGACCGCATCGCTCAGCTTATTTGTGAGAGGAT 151662 Query 163723 TGAGACACCCGATGTGGAGGAAATTGGTCTC-CTTGAAGAGACGGAGAGGGGTGCGGGTG 163781 | | ||| | ||||||| ||| || ||||| ||||||||||| || | Sbjct 151663 TTATCTTCCCCAGCTGGAGGAG-TTGCCTTCTCTTGATTCTACGGAGAGGGGCAGTGGCG 151721 Query 163782 GTTTTGGGTCTACTGGCA 163799 | | ||| || ||||||| Sbjct 151722 GCTATGGCTCGACTGGCA 151739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620708786799040