Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq284 100 3e-16 seq536 82.4 9e-11 seq86 82.4 9e-11 >seq284 Length=917541 Score = 100 bits (110), Expect = 3e-16 Identities = 125/171 (73%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 119528 GATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGAT 119587 |||||||||||||||||| || |||||||||| ||| || ||||| | ||| ||||| Sbjct 769003 GATGAGCTCATTACTGAATGTGAGACCAGGCATGATTCCCCTCTTCTTCAACCAGAAGAT 768944 Query 119588 GGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTC 119647 ||| || ||||| ||||||||||| || ||| || ||||| | | |||||| Sbjct 768943 TGCAGCGAAGGAGCCAGAGAAGAAGATGCCTTCAACAGCAGCAAAAGCAACAACACGCTC 768884 Query 119648 AGCAAAAGGTCGAGACTTGT---CGAACCACTTGAGAGCCCAGTTGGCCTT 119695 ||| | || ||| | | ||| |||||||| |||||||| ||||| Sbjct 768883 AGCGTAGGGGGAAGAATCATCACCGATCCACTTGATAGCCCAGTCTGCCTT 768833 >seq536 Length=563759 Score = 82.4 bits (90), Expect = 9e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 168430 TTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACA 168489 ||||| || || ||||| || || || |||||| ||||| || || ||||| ||| Sbjct 376271 TTACCTCGAAGGGGAAACACACCGTACCGATCTCGGCCCACAACTCCCAGCCCAGCCACA 376212 Query 168490 GCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTGCC 168549 || | || || ||||| || ||||| |||| |||||| ||||| | | || | Sbjct 376211 GCCAAAGACTTGGCTGAGTCTCCCTCGGTCAAGATGAGAGTACAGTGTTTGGAGTTCTTG 376152 Query 168550 GTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACC 168587 || || || | ||| |||||||||| ||||||||||| Sbjct 376151 GTGCCGGCATCGTTAGCATCGTCCAGCTTGGGGATACC 376114 >seq86 Length=1707986 Score = 82.4 bits (90), Expect = 9e-11 Identities = 71/88 (81%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||| ||||| ||||||| || |||| ||||||||||||| | Sbjct 216610 TAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAATGTCATGGGTTCGAGCCCCATA 216551 Query 136777 GGGAACAGCTTTTAGATATATTTTTTGT 136804 | |||| |||| ||||||||| Sbjct 216550 TTGGCCAGC-----GATAAATTTTTTGT 216528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588944106949600