Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq677 86.0 7e-12 seq4072 84.2 3e-11 >seq677 Length=433858 Score = 86.0 bits (94), Expect = 7e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| | | |||||||| | ||| ||||| ||||||||| || ||| || || || Sbjct 166438 CTCATCAGGAGCGGTGTACTCCACAATCTCTGTGCACAAGTTGCTACACTTGATGGTGCC 166379 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || |||| ||||| |||| ||| || || ||||| | |||||| || || || Sbjct 166378 CAGGTTCTGCTGGTTGGACTTTCGGTTACAGCTGTCTTTGTACAACATGTACGGAGTTCC 166319 Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646 |||||||||||||||| | || || | ||||| Sbjct 166318 TGTCTCCGTCTGTGACTCAATGATGGCGTACCACA 166284 >seq4072 Length=1199 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 2589 AATCACCTGGAAATCCCTGCAAATTGAAACATTCGCGGGGTGTAATCTTTCGTATACCTA 2648 |||| | ||| |||| || || |||| ||||| | || || | |||| ||| ||| Sbjct 967 AATCTTCGGGATATCCTTGAAATCTGAAGCATTCCCTTGGCGTTAATTTTCTTATCCCTT 908 Query 2649 TCTCATCCTTAATGAGTGGTACATTATGACCACCACCCCCCATGTTAGCGGTAAGGGTCG 2708 | | ||| || || ||||| |||||||| || ||||||||||| || | || | Sbjct 907 TATTATCAAGGATAAGAGGTACGTTATGACCCCCTGTACCCATGTTAGCAGTCAACGTGG 848 Query 2709 GGCATAGATTACTCTTATTTTCTCGAACATA 2739 |||||||||||||||| ||||| | ||||| Sbjct 847 GGCATAGATTACTCTTGTTTTCCCTCACATA 817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589948852539680