Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq170 156 9e-33 seq156 154 3e-32 seq937 89.7 1e-12 >seq170 Length=1283570 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| ||||||||||| || |||||||| || | ||||| | |||||||| Sbjct 1121665 ACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCTTCC 1121724 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| || || || ||||||||||| || Sbjct 1121725 AGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATCCCTTCTTTGTCCTGT 1121784 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || |||||||| |||||||| |||||| |||||||| | ||||| Sbjct 1121785 ATCTTGGCCTTCACATTCTCAATAGTGTCCGATGGTTCCACCTCAAGGGTGATTGTCTTG 1121844 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | ||||| Sbjct 1121845 CCAGTAAGTGTTTTCACAAAGATCTGCAT 1121873 Score = 109 bits (120), Expect = 1e-18 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| ||||||||||| || |||||||| |||| ||||| | |||||||| Sbjct 1115044 ACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCGGACAGAGTGCGGCCATCTTCC 1115103 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 |||||||| || || ||||| || ||||||||||| || || |||||| Sbjct 1115104 AGCTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCAGGGGGGATGCCT 1115151 Score = 91.5 bits (100), Expect = 3e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| ||||||||||| || |||||||| || | ||||| | |||||||| Sbjct 1114051 ACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCTTCC 1114110 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 |||||||| || || ||||| || || || ||||| || || || ||| Sbjct 1114111 AGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATTCCT 1114158 Score = 91.5 bits (100), Expect = 3e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| ||||||||||| || |||||||| || | ||||| | |||||||| Sbjct 1117514 ACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCTTCC 1117573 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 |||||||| || || ||||| || || || ||||| || || || ||| Sbjct 1117574 AGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATTCCT 1117621 Score = 91.5 bits (100), Expect = 3e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| ||||||||||| || |||||||| || | ||||| | |||||||| Sbjct 1118282 ACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCTTCC 1118341 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 |||||||| || || ||||| || || || || || || || |||||| Sbjct 1118342 AGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCT 1118389 Score = 91.5 bits (100), Expect = 3e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| ||||||||||| || |||||||| || | ||||| | |||||||| Sbjct 1120834 ACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCTTCC 1120893 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 |||||||| || || ||||| || || || ||||| || || || ||| Sbjct 1120894 AGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATTCCT 1120941 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| ||||||||||| || |||||||| || | ||||| | |||||||| Sbjct 1111807 ACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCTTCC 1111866 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 |||||||| || || || || || || || ||||| || || || ||| Sbjct 1111867 AGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGGGGGATTCCT 1111914 >seq156 Length=1397929 Score = 154 bits (170), Expect = 3e-32 Identities = 164/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCAT 194986 ||| || || ||||| || |||||||| || || ||||| |||| |||| || | |||| Sbjct 360883 CAAGACTAGATGAAGGGTTGACTCTTTCTGGATGTTGTAGTCGGACAAG-GTACGGCCAT 360825 Query 194987 CTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGT 195046 |||| ||||| || || || |||||||| ||||| || ||||| ||||| || ||||||| Sbjct 360824 CTTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTGT 360765 Query 195047 CTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCG 195106 |||| ||||| ||| |||||||||||||||||||| |||||||| || || | | Sbjct 360764 CTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGG 360705 Query 195107 TCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || |||| || || || || | ||||| Sbjct 360704 TTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 360671 Score = 149 bits (164), Expect = 1e-30 Identities = 157/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996 || |||||||||||||| || || ||||| || | |||| || | ||||| || ||||| Sbjct 360417 TGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAG-GTACGGCCATCCTCAAGCTG 360359 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || |||||||| ||||| || ||||| ||||| || ||||||||||| ||||| Sbjct 360358 TTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTGTCTTGGATTTT 360299 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| |||||||||||||||||||| |||||||| || || | || || || || Sbjct 360298 GGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTTTTGCCAGT 360239 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | ||||| Sbjct 360238 CAGGGTCTTGACGAAGATCTGCAT 360215 Score = 145 bits (160), Expect = 2e-29 Identities = 156/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996 || |||||||||||||| || || ||||| || | |||| || | ||||| || ||||| Sbjct 359961 TGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAG-GTACGGCCATCCTCAAGCTG 359903 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || |||||||| ||||| || ||||| ||||| || ||||||||||| ||||| Sbjct 359902 TTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTGTCTTGGATTTT 359843 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||||||||||||||||| || |||||||| || || | || || || || Sbjct 359842 GGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACTTCTAGAGTGATGGTTTTGCCAGT 359783 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | ||||| Sbjct 359782 CAGGGTCTTGACGAAGATCTGCAT 359759 Score = 136 bits (150), Expect = 9e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996 || |||||||||||||| || || ||||| || | |||| || | ||||| || ||||| Sbjct 359733 TGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAG-GTACGGCCATCCTCAAGCTG 359675 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| | || || || ||||||||||| || ||||||||||| ||||| Sbjct 359674 TTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATTTT 359615 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| |||||||||||||||||||| |||||||| || || | || || || || Sbjct 359614 GGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTTTTGCCAGT 359555 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || || || | ||||| Sbjct 359554 CAGGGTCTTGACAAAGATCTGCAT 359531 Score = 136 bits (150), Expect = 9e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996 || |||||||||||||| || || ||||| || | |||| || | |||||||| | ||| Sbjct 360189 TGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAG-GTACGGCCATCTTCCAACTG 360131 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| | || || || || |||||||| || ||||||||||| ||||| Sbjct 360130 TTTGCCGGCAAAGATCAATCTCTGCTGATCGGGAGGAATTCCCTCTTTGTCTTGGATTTT 360071 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| |||||||||||||||||||| |||||||| || || | || || || || Sbjct 360070 GGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTTTTGCCAGT 360011 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | ||||| Sbjct 360010 CAGGGTCTTGACGAAGATCTGCAT 359987 Score = 136 bits (150), Expect = 9e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996 || |||||||||||||| || || ||||| || | |||| || | ||||| || ||||| Sbjct 360645 TGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAG-GTACGGCCATCCTCAAGCTG 360587 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| | || || || ||||||||||| || ||||||||||| ||||| Sbjct 360586 TTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATTTT 360527 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||||||||||||||||| || |||||||| || || | || || || || Sbjct 360526 GGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACTTCTAGAGTGATGGTTTTGCCAGT 360467 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | ||||| Sbjct 360466 CAGGGTCTTGACGAAGATCTGCAT 360443 Score = 132 bits (146), Expect = 1e-25 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 || ||||||| || |||||||| ||||| ||||| || ||||||||||| | || || Sbjct 357934 CTAAGTCTCAGCACCAGGTGAAGTGTGGATTCTTTCTGGATATTGTAATCTGAGAGTGTG 357875 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| | |||||| || ||||| || | | || || || || || || || Sbjct 357874 CGTCCATCTTCCAACTGCTTTCCAGCGAAAATCAACCTCTGCTGATCGGGCGGGATTCCC 357815 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099 |||||||| || || ||| || ||||| ||||| ||||| || ||||| |||||| Sbjct 357814 TCTTTGTCCTGGATCTTTGCTTTCACGTTTTCAATTGTGTCAGACGGCTCCACCTCAAGG 357755 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | ||| || ||||| | ||||| Sbjct 357754 GTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 357714 Score = 118 bits (130), Expect = 2e-21 Identities = 162/224 (72%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||||||||| | || | || || ||||| ||||| || || || || |||| |||| | Sbjct 358628 TCTGAGTCTGAGCACCAAATGGAGTGTGGATTCTTTCTGGATGTTATAGTCGGACAAG-G 358570 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| ||||| || ||||| || || || |||||||| | || || ||||| || || | Sbjct 358569 TTCTGCCATCCTCAAGCTGTTTGCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTC 358510 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 | |||||||| || || || || || |||||||||||||| || |||||||| | Sbjct 358509 CCTCTTTGTCCTGGATCTTAGCTTTCACATTCTCAATGGTGTCAGACGGCTCCACTTCCA 358450 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | ||||| ||||| | || || || || | |||||| Sbjct 358449 ATGTGATAGTCTTGCCTGTGAGGGTCTTCACAAAAATCTGCATT 358406 >seq937 Length=262530 Score = 89.7 bits (98), Expect = 1e-12 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 195034 ATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACT 195093 || ||||||||||| ||||| ||| |||||| || ||||||||||| || |||||| Sbjct 206376 ATACCTTCTTTGTCCTGAATCTTTGCCTTGACATTTTCAATGGTGTCAGACGGTTCCACC 206317 Query 195094 TCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 |||||||| | |||||| ||||| | || || || || | ||||||| Sbjct 206316 TCAAGGGTGATCGTCTTGCCTGTGAGTGTCTTCACAAAAATCTGCATTT 206268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109420019610644