Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq284 131 2e-25 >seq284 Length=917541 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 19345 ACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATA 19404 |||| ||||||||| || |||||||| ||||| |||||||| || | |||||| ||| Sbjct 767119 ACCAGATTTTCATTGACAATTCCATCGCTAGCAGCAAAAAAGGCCAGAACATGTGAAATG 767060 Query 19405 AAATGTTTTTCATCTGAGGTTAATGTATTCCAA-TCATTAATATCTTTAGATAAATCTAC 19463 || ||||| || ||||| || | | |||| | | | || || || || || || || Sbjct 767059 AAGTGTTTCTCTTCTGAC-TTCAGCTCTTCCCAGTGAGCAAGGTCCTTTGACAAGTCGAC 767001 Query 19464 TTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATA 19523 ||| || | ||||||||||| ||||||||||| || ||||| | ||| |||||| |||| Sbjct 767000 TTCCTCCGCAGTCCAAAAAGAGGCCTCTGCTTTCTTGTACATTTGCCAGATATCATGATA 766941 Query 19524 TTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTAAGAATAGGTTC 19574 | || || || | |||||||| | || ||||| |||| ||||| Sbjct 766940 CTCAATTGGGAAGACCACAAATCTCCTGGGGTTGTCTTTTAGAAGCGGTTC 766890 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 ||||||||| || || | |||||| ||||| | ||||||||| | ||| || || | Sbjct 769016 CCTCGTCTCGGCTGATGAGCTCATTACTGAATGTGAGACCAGGCATGATTCCCCTCTTCT 768957 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | |||||||| || | ||| || || ||||| ||||| || ||||| || || ||||||| Sbjct 768956 TCAACCAGAAGATTGCAGCGAAGGAGCCAGAGAAGAAGATGCCTTCAACAGCAGCAAAAG 768897 Query 19103 CAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAG 19162 |||| | | || | || | | || || | ||||| || | ||||| || | Sbjct 768896 CAACAACACGCTCAGCGTAGGGGGAAGAATCATCACCGATCCACTTGATAGCCCAGTCTG 768837 Query 19163 CCTTCTTTTTTACACATGGCATTGTCTCTAT 19193 |||| | | | ||||| |||| ||||| || Sbjct 768836 CCTTTTCTCTGACACACGGCAAGGTCTCGAT 768806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562078361808480