Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq156 143 2e-29 >seq156 Length=1397929 Score = 143 bits (158), Expect = 2e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || |||||||| || ||||||||||| | || || | |||| ||||| ||| Sbjct 357916 TGAAGTGTGGATTCTTTCTGGATATTGTAATCTGAGAGTGTGCGTCCATCTTCCAACTGC 357857 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || ||||| | ||| ||||||||||| || || ||||| || || || ||| Sbjct 357856 TTTCCAGCGAAAATCAACCTCTGCTGATCGGGCGGGATTCCCTCTTTGTCCTGGATCTTT 357797 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| || |||| | |||||||||| ||||| ||||| |||| || ||||| || Sbjct 357796 GCTTTCACGTTTTCAATTGTGTCAGACGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTG 357737 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | ||| || || || ||||||||| Sbjct 357736 AGAGTCTTGACGAAGATCTGCATG 357713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396257477986524