Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq243 118 8e-22 seq156 91.5 1e-13 >seq243 Length=1059084 Score = 118 bits (130), Expect = 8e-22 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 9082 TCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACGACAAAGTCTGTGTCGGAATGA 9141 |||||||| | ||||| || | |||||| || || || ||||| ||| ||||| Sbjct 151656 TCACAAATAAGCTGAGCGATGCGGTCCCCTTTGTTGACCACAAACTCTTCCTCGGAGAAG 151597 Query 9142 TTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATCACACCAGCACCCACG 9201 ||||||| || || || || || |||| ||| |||| || || || || ||||| ||| Sbjct 151596 TTGAACATGACGACCCCGACATTCCCCCGGTAGTCCTGGTCAATAACCCCGGCACCGACG 151537 Query 9202 TCGATGAAGTGCTTGACCGCTAGTCCAGAGCGGGGCGCGATTCGACCGTAGCATCCCACC 9261 ||||||||||| ||| | || ||||| ||||| ||||| | || |||||||| || | Sbjct 151536 TCGATGAAGTGTTTGGCAGCCAGTCCCGAGCGAGGCGCCACCCGGCCGTAGCAGCCATCG 151477 Query 9262 GGTAA 9266 ||||| Sbjct 151476 GGTAA 151472 >seq156 Length=1397929 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 48537 TCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCA 48596 || || ||||| || | || ||||| || || ||| ||||| || ||||||||||| Sbjct 357943 TCACCTCCCCTAAGTCTCAGCACCAGGTGAAGTGTGGATTCTTTCTGGATATTGTAATCT 357884 Query 48597 GATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTG 48656 || || | || | || ||||||||||| || || || |||| | ||| ||||| | Sbjct 357883 GAGAGTGTGCGTCCATCTTCCAACTGCTTTCCAGCGAAAATCAACCTCTGCTGATCGGGC 357824 Query 48657 GGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCC 48716 || | ||||| ||||| |||||| ||| || | | | || |||| |||| Sbjct 357823 GGGATTCCCTCTTTGTCCTGGATCTTTGCTTTCACGTTTTCAATTGTGTCAGACGGCTCC 357764 Query 48717 ACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | || || || || || || | ||| || || || |||||||| Sbjct 357763 ACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 357714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380917487923236