Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq677 140 6e-28 seq88 140 6e-28 >seq677 Length=433858 Score = 140 bits (154), Expect = 6e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACA 222003 ||| || ||||||||| ||| || || | || ||| |||||| ||| | ||||| Sbjct 164103 ATACAGTTTGTCAAACTCTTCCCCCCACACATCAGCCAAGCCTGGGCACTCGTGAGGACA 164044 Query 222004 CATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAG 222063 ||||| | |||||| || |||| || || ||||||| | |||||||||||||| Sbjct 164043 CATCAAAGTCCAGTCTCCATTTTCTTCCACTCTGCGCATGAACAAGTCCGGGATCCACAT 163984 Query 222064 CGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA 222123 || | || | ||| |||| || ||||||||| | || |||| ||| |||| ||||| Sbjct 163983 GGCGTAGAACAAATCCCTGGCCCTCTGCTCCTCAGCACCAGTGTTCTTCTTCAGGTCCAA 163924 Query 222124 AAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGC 222165 |||||||| ||||| || ||||| |||||||| || ||||| Sbjct 163923 GAACTCAAAGATGTCGGCATGCCATGGCTCCAGGTAAACGGC 163882 >seq88 Length=1720321 Score = 140 bits (154), Expect = 6e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACA 222003 ||| || ||||||||| ||| || || | || ||| |||||| ||| | ||||| Sbjct 1607710 ATACAGTTTGTCAAACTCTTCCCCCCACACATCAGCCAAGCCTGGGCACTCGTGAGGACA 1607769 Query 222004 CATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAG 222063 ||||| | |||||| || |||| || || ||||||| | |||||||||||||| Sbjct 1607770 CATCAAAGTCCAGTCTCCATTTTCTTCCACTCTGCGCATGAACAAGTCCGGGATCCACAT 1607829 Query 222064 CGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA 222123 || | || | ||| |||| || ||||||||| | || |||| ||| |||| ||||| Sbjct 1607830 GGCGTAGAACAAATCCCTGGCCCTCTGCTCCTCAGCACCAGTGTTCTTCTTCAGGTCCAA 1607889 Query 222124 AAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGC 222165 |||||||| ||||| || ||||| |||||||| || ||||| Sbjct 1607890 GAACTCAAAGATGTCGGCATGCCATGGCTCCAGGTAAACGGC 1607931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928794503054080