Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq156 131 3e-25 >seq156 Length=1397929 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| ||||||| || || |||| ||| | || | |||||| || || ||||| Sbjct 360672 ATACCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCC 360613 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | ||| || | ||||| |||||||| || |||||||| ||||| ||| Sbjct 360612 GACAAGGTACGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGA 360553 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| ||||| ||||| ||||||| || | || ||| || || || | ||| Sbjct 360552 GGAATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCC 360493 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||||||||| || ||||| || || || || || || || || ||||| Sbjct 360492 ACTTCTAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 360443 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191 |||| ||||| | || || |||| ||| | ||| | ||||| || |||||||||| Sbjct 358635 TACCTCCTCTGAGTCTGAGCACCAAATGGAGTGTGGATTCTTTCTGGATGTTATAGTCGG 358576 Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251 | || ||||| ||| || | ||||| |||||||| || | ||||| ||||| || | Sbjct 358575 ACAAGGTTCTGCCATCCTCAAGCTGTTTGCCGGCAAAGATAAGCCTCTGCTGATCTGGGG 358516 Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 | ||||| ||||| || || || || | ||| | ||| ||| || || || | ||| | Sbjct 358515 GGATTCCCTCTTTGTCCTGGATCTTAGCTTTCACATTCTCAATGGTGTCAGACGGCTCCA 358456 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||| | || ||||| || ||||| || || || ||||| || |||||| Sbjct 358455 CTTCCAATGTGATAGTCTTGCCTGTGAGGGTCTTCACAAAAATCTGCATT 358406 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| ||||||| || || |||| ||| | || | |||||| || || ||||| Sbjct 359988 ATACCTCCTCTCAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCC 359929 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | ||| || | ||||| |||||||| || | | || ||||| || Sbjct 359928 GACAAGGTACGGCCATCCTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGG 359869 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| ||||| ||||| ||||||| || | || ||| || || || | ||| Sbjct 359868 GGAATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCC 359809 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||||||||| || ||||| || || || || || || || || ||||| Sbjct 359808 ACTTCTAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 359759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899605683714240