Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq677 87.8 5e-12 seq284 86.0 2e-11 >seq677 Length=433858 Score = 87.8 bits (96), Expect = 5e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 || |||| || |||||||| ||||| ||| || |||||||||||| | |||| || Sbjct 166427 CGGTGTACTCCACAATCTCTGTGCACAAGTTGCTACACTTGATGGTGCCCAGGTTCTGCT 166368 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || || | |||||| || ||||| | ||||| || |||||||||||| ||| Sbjct 166367 GGTTGGACTTTCGGTTACAGCTGTCTTTGTACAACATGTACGGAGTTCCTGTCTCCGTCT 166308 Query 155746 GTG 155748 ||| Sbjct 166307 GTG 166305 >seq284 Length=917541 Score = 86.0 bits (94), Expect = 2e-11 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133073 AGGTTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAA-CAGCA 133131 || ||||| | ||||||||| || | | || || ||||| ||||| || ||| ||| | Sbjct 766917 AGATTTGTGGTCTTCCCAATTGAGTATCATGATATCTGGCAAATGTACAAGAAAGCAG-A 766975 Query 133132 AGATTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGC 133191 | | ||||||||| | ||||| || || || || |||| || |||||||||| Sbjct 766976 GGCCTCTTTTTGGACTGCGGAGGAAGTCGACTTGTCAAAGGACCTTGCTCACTGGGAAGA 767035 Query 133192 CCTTACTGGGGATGAAAAACATTTTATTTCT-ATGATTTTAGCGTTTTTTGCTGCGAGTG 133250 || | || || ||||| || ||||| ||| || | || ||||||||||| || | Sbjct 767036 GCTGAAGTCAGAAGAGAAACACTTCATTTCACATG-TTCTGGCCTTTTTTGCTGCTAGCG 767094 Query 133251 ATGGTATTGTTCTTGAAAAT 133270 |||| ||||| ||||||| Sbjct 767095 ATGGAATTGTCAATGAAAAT 767114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471735908603884