Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq695 141 1e-27 seq27 93.3 5e-13 seq439 86.0 8e-11 >seq695 Length=442779 Score = 141 bits (156), Expect = 1e-27 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || ||||| ||| || ||| | || |||||||||||||| || | | || Sbjct 66840 GCTTGGCGAGCTCGCCTGGCAAGAGCAGCCTGACAGCGGTCTGGATCTCTCGGGAGGTGA 66899 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | | |||||| | || || ||||||| |||||||| |||||| |||| | Sbjct 66900 TGGTGCTCCTCTTGTTGTAATGAGCGAGACGGCTGGCCTCGGCAGAGATGCGCTCGAAGA 66959 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| || || || |||||||||| ||||| | ||| |||||||| |||||||| Sbjct 66960 TGTCATTCACGAAAGAGTTCATGATAGACATAGCTTTGGAAGAGATGCCAGTGTCGGGGT 67019 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| ||||| | ||||||||||||| Sbjct 67020 GCACTTGCTTCAACACCTTGTAGATG 67045 >seq27 Length=2398530 Score = 93.3 bits (102), Expect = 5e-13 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 1852536 TGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATGGGCACAAAGTAGCCTA 1852595 ||||||||||||| |||| |||||||| |||||||| | ||||||||||||||| | | Sbjct 71498 TGACCCGACAGCCAGCCTCCAGAAAGTCTGCCAGTTTACACATGGGCACAAAGTAGGCGA 71557 Query 1852596 GGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATA 1852629 ||| || ||||| || || || |||||||| || Sbjct 71558 TGTGAGGTTTGCCTGTGGGGGCGGTGCCCCAGTA 71591 >seq439 Length=671852 Score = 86.0 bits (94), Expect = 8e-11 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 733184 CACGCCCGACATCGTGATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGAT 733243 |||||| |||||| | |||||||| |||||||| || || | |||||||| ||| | | Sbjct 239304 CACGCCAGACATCATCATCAACCCCCACGCCATTCCATCCAGAATGACCATTGGCCATTT 239363 Query 733244 GCTCGAGGCCCTCCTGGGCAAGGTGGCCTGCC-GCGAGGGCTACATCGGCGACGGCACGC 733302 ||||| ||||| ||||||||||| ||||| | |||| | || || |||| ||| | Sbjct 239364 AATCGAGTGCCTCCAGGGCAAGGTGG-CTGCCAACAAGGGGGAGATTGGAGACGCCACCC 239422 Query 733303 CCTT 733306 |||| Sbjct 239423 CCTT 239426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106783695793244