Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq156 141 8e-29 seq170 102 7e-17 seq769 84.2 2e-11 >seq156 Length=1397929 Score = 141 bits (156), Expect = 8e-29 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||||||| | || || || || || ||||| || || || ||||| | ||||| | Sbjct 359531 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGT-GGAGCCATC 359589 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || | ||| |||||||||||||| ||||| ||||| |||| Sbjct 359590 GGACACCATTGAGAACGTGAAGGCCAAA-ATCCAAGACAAAGAGGGAATTCCTCCAGATC 359648 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | |||||||||||||| |||||||| |||||| | | | |||| || || | Sbjct 359649 AGCAGAGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACA 359708 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || || || || || || || |||||| |||| || | ||||| Sbjct 359709 ACATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 359757 Score = 138 bits (152), Expect = 1e-27 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 ||||||||||| | || || || || || ||||| || || || ||||| | ||||| | Sbjct 359759 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTAGAAGT-GGAGCCATC 359817 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || | ||| |||||||||||||| ||||| || || |||| Sbjct 359818 TGACACCATTGAGAACGTGAAGGCCAAA-ATCCAAGACAAAGAGGGAATTCCCCCAGATC 359876 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | |||||| | ||||||||||| |||||||| |||||| | | | |||| || || | Sbjct 359877 AGCAACGTCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACA 359936 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || || || || || || || |||||| |||| || | ||||| Sbjct 359937 ACATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 359985 Score = 138 bits (152), Expect = 1e-27 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 ||||||||||| | || || || || || ||||| || || || ||||| | ||||| | Sbjct 359987 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGT-GGAGCCATC 360045 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || | ||| |||||||||||||| ||||| |||||||||| Sbjct 360046 GGACACCATTGAGAACGTGAAGGCCAAA-ATCCAAGACAAAGAGGGAATTCCTCCCGATC 360104 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | |||||||||||||| |||||| |||| ||| | | | |||| || || | Sbjct 360105 AGCAGAGATTGATCTTTGCCGGCAAACAGTTGGAAGATGGCCGTACCTTGTCGGACTACA 360164 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || || || || || || || |||||| |||| || | ||||| Sbjct 360165 ACATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 360213 Score = 138 bits (152), Expect = 1e-27 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 ||||||||||| | || || || || || ||||| || || || ||||| | ||||| | Sbjct 360215 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGT-GGAGCCATC 360273 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || | ||| |||||||||||||| ||||| || || |||| Sbjct 360274 GGACACCATTGAGAACGTGAAGGCCAAA-ATCCAAGACAAAGAGGGAATTCCCCCAGATC 360332 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | |||||| | ||||||||||| |||||||| |||||| | | | |||| || || | Sbjct 360333 AGCAACGTCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACA 360392 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || || || || || || || |||||| |||| || | ||||| Sbjct 360393 ACATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 360441 Score = 138 bits (152), Expect = 1e-27 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 ||||||||||| | || || || || || ||||| || || || ||||| | ||||| | Sbjct 360443 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAAACCATCACTCTAGAAGT-GGAGCCATC 360501 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || | ||| |||||||||||||| ||||| ||||| |||| Sbjct 360502 TGACACCATTGAGAACGTGAAGGCCAAA-ATCCAAGACAAAGAGGGAATTCCTCCAGATC 360560 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | |||||||||||||| |||||||| |||||| | | | |||| || || | Sbjct 360561 AGCAGAGATTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGTACCTTGTCGGACTACA 360620 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || || || || || || || |||||| |||| || | ||||| Sbjct 360621 ACATCCAGAAAGAGTCCACTCTCCATTTGGTGCTGCGTCTGAGAGGAGG 360669 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || || || || ||||| || | ||||| || | | Sbjct 358407 ATGCAGATTTTTGTGAAGACCCTCACAGGCAAGACTATCACATTGGAAGTGGAGCCGTCT 358466 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||| |||||||| ||||| || || ||||| Sbjct 358467 GACACCATTGAGAATGTGAAAGCTAAGATCCAGGACAAAGAGGGAATCCCCCCAGATCAG 358526 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||||||||| |||||||| |||||| |||| | |||| || |||||| Sbjct 358527 CAGAGGCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCAGAACCTTGTCCGACTATAAC 358586 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || || ||||| ||||| || |||||| Sbjct 358587 ATCCAGAAAGAATCCACACTCCATTTGGTG 358616 Score = 129 bits (142), Expect = 5e-25 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||||||| | || || || || || ||||| || || || ||||| | ||||| | Sbjct 360671 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTGGAAGT-GGAGCCATC 360729 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || | ||| |||||||||||||| ||||| || || |||| Sbjct 360730 GGACACCATTGAGAACGTGAAGGCCAAA-ATCCAAGACAAAGAGGGAATTCCCCCAGATC 360788 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | |||||| | ||||||||||| |||||||| || ||| | | | |||| || || | Sbjct 360789 AGCAACGTCTTATCTTTGCCGGCAAACAGCTTGAAGATGGCCGTACCTTGTCCGACTACA 360848 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || || || || || || || | || ||||| |||| || || Sbjct 360849 ACATCCAGAAAGAGTCAACCCTTCATCTAGTCTTGCGTCTGCGTGGTGG 360897 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || | | Sbjct 357714 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTGGAGCCGTCT 357773 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || ||| ||||||||| |||||||| ||||| || |||||||| Sbjct 357774 GACACAATTGAAAACGTGAAAGCAAAGATCCAGGACAAAGAGGGAATCCCGCCCGATCAG 357833 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 || | ||||| || || || || ||| |||| || | || ||| | |||||||| || Sbjct 357834 CAGAGGTTGATTTTCGCTGGAAAGCAGTTGGAAGA-TGGACGCACACTCTCAGATTACAA 357892 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || ||||| ||||| ||| ||||| || || | | ||||| Sbjct 357893 TATCCAGAAAGAATCCACACTTCACCTGGTGCTGAGACTTAGGGGAGG 357940 >seq170 Length=1283570 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | ||||| || || || || || || || || || || ||| | | Sbjct 1121874 GATGCAGATCTTTGTGAAAACACTTACTGGCAAGACAATCACCCTTGAGGTGGAACCATC 1121815 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||| || ||||||||||| || || || || || Sbjct 1121814 GGACACTATTGAGAATGTGAAGGCCAAGATACAGGACAAAGAAGGGATCCCCCCTGACCA 1121755 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||||||||| || || |||||||| ||| | | ||||||| || || Sbjct 1121754 GCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTGTCAGACTACAA 1121695 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || || || || || || || | ||| | || | || |||||| Sbjct 1121694 TATCCAGAAAGAGTCCACCCTTCATCTTGTGCTTCGTCTCCGAGGAGGC 1121646 >seq769 Length=365539 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864 ||| || ||||| || || || | ||||| ||||| || || ||||| |||||| | Sbjct 68713 AGGCATTCCTCCTGACCAGCAGAGGTTGATTTTTGCTGGCAAGCAGCTTGAGGATGGTCG 68654 Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924 | ||||||| || |||||||||||||| || || || |||||||||||| || | || Sbjct 68653 TACGTTGTCAGACTACAACATTCAAAAGGAGTCTACCCTTCACTTGGTGTTGAGACTCCG 68594 Query 24925 CGGAGGCGG 24933 || || || Sbjct 68593 TGGTGGTGG 68585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449873238044960