Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq695 181 2e-39 seq439 91.5 2e-12 seq27 91.5 2e-12 >seq695 Length=442779 Score = 181 bits (200), Expect = 2e-39 Identities = 187/243 (77%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||| |||||| |||| || ||||| ||| Sbjct 66801 TGTACTTGGTGACAGCCTTGGTTCCCTCACTGACAGCGTGCTTGGCGAGCTCGCCTGGCA 66860 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 || ||| | || |||||||||||||| |||| | ||| ||| | | ||||| || | Sbjct 66861 AGAGCAGCCTGACAGCGGTCTGGATCTCTCGGGAGGTGATGGTGCTCCTCTTGTTGTAAT 66920 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || |||| |||||||| |||||| |||| ||||| || || || ||||| Sbjct 66921 GAGCG--AGACGGCTGGCCTCGGCAGAGATGCGCTCGAAGATGTCATTCACGAAAGAGTT 66978 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | |||| |||||||| |||||||||||| ||||| | |||||| Sbjct 66979 CATGATAGACATAGCTTTGGAAGAGATGCCAGTGTCGGGGTGCACTTGCTTCAACACCTT 67038 Query 1485708 GTA 1485710 ||| Sbjct 67039 GTA 67041 >seq439 Length=671852 Score = 91.5 bits (100), Expect = 2e-12 Identities = 116/155 (75%), Gaps = 5/155 (3%) Strand=Plus/Plus Query 653718 AGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCGTCATCAACCCGCACG 653777 |||| ||||||| || || | | |||| |||||| |||||| |||||||||| |||| Sbjct 239276 AGGACATGCCGT--TCACCT-GTGAGGGCCTCACGCCAGACATCATCATCAACCCCCACG 239332 Query 653778 CCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCCTGGGCAAGGTGGCCT 653837 |||| || || | |||||||| ||| | | || ||| ||||| ||||||||||| || Sbjct 239333 CCATTCCATCCAGAATGACCATTGGCCATTTAATCGAGTGCCTCCAGGGCAAGGTGG-CT 239391 Query 653838 GCC-GCGAGGGCTACGTGGGCGACGGCACCCCGTT 653871 ||| | |||| | | || |||| |||||| || Sbjct 239392 GCCAACAAGGGGGAGATTGGAGACGCCACCCCCTT 239426 >seq27 Length=2398530 Score = 91.5 bits (100), Expect = 2e-12 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 2411878 CTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCCC 2411937 || |||||||| || |||| |||||||| ||||||||| | ||||||||||||||| | Sbjct 71497 CTGACCCGACAGCCAGCCTCCAGAAAGTCTGCCAGTTTACACATGGGCACAAAGTAGGCG 71556 Query 2411938 AGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATA 2411972 | || || ||||| || || ||||||||||| || Sbjct 71557 ATGTGAGGTTTGCCTGTGGGGGCGGTGCCCCAGTA 71591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915785585401748