Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq170 120 3e-22 seq156 118 1e-21 >seq170 Length=1283570 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||||||||| |||||||| || || ||| | | | || || |||| Sbjct 1121670 ATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCA-TCTTCCAGCT 1121728 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || || ||||||||||| || ||||| ||||| ||||| |||| Sbjct 1121729 GCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATCCCTTCTTTGTCCTGTATCT 1121788 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| ||||| | || ||||| || | ||||| || ||||| | Sbjct 1121789 TGGCCTTCACATTCTCAATAGTGTCCGATGGTTCCACCTCAAGGGTGATTGTCTTGCCAG 1121848 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || ||||| || || |||||||| Sbjct 1121849 TAAGTGTTTTCACAAAGATCTGCAT 1121873 >seq156 Length=1397929 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| ||||||||||| | ||| | | | || || | |||||| || Sbjct 357910 GTGGATTCTTTCTGGATATTGTAATCTGAGAGTGTGCGTCCA-TCTTCCAACTGCTTTCC 357852 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | || |||||| ||||| ||||| || || ||||| ||||||| || Sbjct 357851 AGCGAAAATCAACCTCTGCTGATCGGGCGGGATTCCCTCTTTGTCCTGGATCTTTGCTTT 357792 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | |||||||| || | ||||| ||| ||||| || ||||| Sbjct 357791 CACGTTTTCAATTGTGTCAGACGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGAGT 357732 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 357731 CTTGACGAAGATCTGCATG 357713 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAG 133513 ||||| | |||||||||||||| || ||||| || || || | | | ||||| || Sbjct 359964 AAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCA-TCCTCAAG 359906 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || | || || || ||||| || || || || || || ||||| ||| Sbjct 359905 CTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTGTCTTGGAT 359846 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | ||||| ||||| | |||||||| || | |||| ||||||||| Sbjct 359845 TTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACTTCTAGAGTGATGGTTTTGCC 359786 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| |||||||| Sbjct 359785 AGTCAGGGTCTTGACGAAGATCTGCAT 359759 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAG 133513 ||||| | |||||||||||||| || ||||| || || || | | | ||||| || Sbjct 360420 AAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCA-TCCTCAAG 360362 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || | || || || ||||| || || || || || || ||||| ||| Sbjct 360361 CTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTGTCTTGGAT 360302 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | ||||| ||||| | |||||||| || | |||| ||||||||| Sbjct 360301 TTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTTTTGCC 360242 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| |||||||| Sbjct 360241 AGTCAGGGTCTTGACGAAGATCTGCAT 360215 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAG 133513 ||||| | |||||||||||||| || ||||| || || || | | | ||||| || Sbjct 360648 AAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCA-TCCTCAAG 360590 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || | || | | |||||| || ||||| || || || ||||| ||| Sbjct 360589 CTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGAT 360530 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | ||||| ||||| | |||||||| || | |||| ||||||||| Sbjct 360529 TTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACTTCTAGAGTGATGGTTTTGCC 360470 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| |||||||| Sbjct 360469 AGTCAGGGTCTTGACGAAGATCTGCAT 360443 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAG 133513 ||||| | |||||||||||||| || ||||| || || || | | | ||||| || Sbjct 359736 AAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCA-TCCTCAAG 359678 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || | || | | |||||| || ||||| || || || ||||| ||| Sbjct 359677 CTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGAT 359618 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | ||||| ||||| | |||||||| || | |||| ||||||||| Sbjct 359617 TTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTTTTGCC 359558 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || || |||||||| Sbjct 359557 AGTCAGGGTCTTGACAAAGATCTGCAT 359531 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAG 133513 ||||| | |||||||||||||| || ||||| || || || | | | || || | Sbjct 360192 AAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCA-TCTTCCAA 360134 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || | || | | |||||| |||||||| || || || ||||| ||| Sbjct 360133 CTGTTTGCCGGCAAAGATCAATCTCTGCTGATCGGGAGGAATTCCCTCTTTGTCTTGGAT 360074 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | ||||| ||||| | |||||||| || | |||| ||||||||| Sbjct 360073 TTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTTTTGCC 360014 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| |||||||| Sbjct 360013 AGTCAGGGTCTTGACGAAGATCTGCAT 359987 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGCT 133515 ||| | ||| ||||||||||| || ||||| ||| || || | | | || || |||| Sbjct 360874 ATGAAGGGTTGACTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCA-TCTTCAAGCT 360816 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| || | || || || ||||| || || || || || || ||||| ||| | Sbjct 360815 GTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTGTCTTGGATTT 360756 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| ||||| | |||||||| || | |||| ||||||||| | Sbjct 360755 TGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTTTTGCCAG 360696 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || || || |||||||| Sbjct 360695 TCAGGGTCTTGACAAAGATCTGCAT 360671 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||||| |||||||| || || || ||| || || ||||| ||| Sbjct 358612 AAATGGAGTGTGGATTCTTTCTGGATGTTATAGTCGGACAAGGTTCTGCCATCCTCAAGC 358553 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || ||||| || | || |||| |||||| || || ||||| || || ||||| |||| Sbjct 358552 TGTTTGCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCCTCTTTGTCCTGGATC 358493 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || || | | ||||| ||||| | |||||||| || | |||| || ||||| Sbjct 358492 TTAGCTTTCACATTCTCAATGGTGTCAGACGGCTCCACTTCCAATGTGATAGTCTTGCCT 358433 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || ||||||||||| Sbjct 358432 GTGAGGGTCTTCACAAAAATCTGCAT 358407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483394622763680