Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq156 131 2e-25 >seq156 Length=1397929 Score = 131 bits (144), Expect = 2e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||||| || | ||| | | |||||||||| || |||||||||||| || ||| Sbjct 360892 ACGCAGACGCAAGACTAGATGAAGGGTTGACTCTTTCTGGATGTTGTAGTCGGACAAGGT 360833 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||| |||||||| |||| | |||| ||||| || |||||||| || || || Sbjct 360832 ACGGCCATCTTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCC 360773 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||||| || ||||| |||| | || | || || | ||||||||||| | Sbjct 360772 CTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAG 360713 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| |||||||| || || | || |||||||| Sbjct 360712 AGTGATGGTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 360671 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||||||| | | |||||||| || ||||||||||| || |||||| | Sbjct 359973 CGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCA 359914 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || |||||||| |||| | |||| ||||| || |||||||| || || || ||||| Sbjct 359913 TCCTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTG 359854 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| |||| | || | || || | ||||||||||| | || | Sbjct 359853 TCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACTTCTAGAGTGATG 359794 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||||||| || || | ||| |||||||| Sbjct 359793 GTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 359759 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||||||| | | |||||||| || ||||||||||| || |||||| | Sbjct 360429 CGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCA 360370 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || |||||||| |||| | |||| ||||| || |||||||| || || || ||||| Sbjct 360369 TCCTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTG 360310 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| |||| | || | || || | ||||||||||| | || | Sbjct 360309 TCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATG 360250 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||||||| || || | ||| |||||||| Sbjct 360249 GTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 360215 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||||||| | | |||||||| || ||||||||||| || |||||| | Sbjct 360657 CGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCA 360598 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || |||||||| |||| | |||| | | ||| ||||||||||| || || ||||| Sbjct 360597 TCCTCAAGCTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCCTCTTTG 360538 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| |||| | || | || || | ||||||||||| | || | Sbjct 360537 TCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACTTCTAGAGTGATG 360478 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||||||| || || | ||| |||||||| Sbjct 360477 GTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 360443 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||||||| | | |||||||| || ||||||||||| || |||||| | Sbjct 359745 CGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCA 359686 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || |||||||| |||| | |||| | | ||| ||||||||||| || || ||||| Sbjct 359685 TCCTCAAGCTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCCTCTTTG 359626 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| |||| | || | || || | ||||||||||| | || | Sbjct 359625 TCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATG 359566 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||||||| || || | || |||||||| Sbjct 359565 GTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 359531 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||||||| | | |||||||| || ||||||||||| || |||||| | Sbjct 360201 CGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCA 360142 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||| |||| | |||| | | ||| ||||| ||||| || || ||||| Sbjct 360141 TCTTCCAACTGTTTGCCGGCAAAGATCAATCTCTGCTGATCGGGAGGAATTCCCTCTTTG 360082 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| |||| | || | || || | ||||||||||| | || | Sbjct 360081 TCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATG 360022 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||||||| || || | ||| |||||||| Sbjct 360021 GTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 359987 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || ||||| || ||||| |||||| || ||| | ||| || Sbjct 358615 ACCAAATGGAGTGTGGATTCTTTCTGGATGTTATAGTCGGACAAGGTTCTGCCATCCTCA 358556 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 |||||||| |||| | |||| || | ||| |||||||| || || || ||||| || Sbjct 358555 AGCTGTTTGCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCCTCTTTGTCCTGG 358496 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || ||||| | || | || || | |||||||||||| | || | || || Sbjct 358495 ATCTTAGCTTTCACATTCTCAATGGTGTCAGACGGCTCCACTTCCAATGTGATAGTCTTG 358436 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || || || | ||||||||||| Sbjct 358435 CCTGTGAGGGTCTTCACAAAAATCTGCAT 358407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476585391503520