Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq156 87.8 2e-12 >seq156 Length=1397929 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | || || || | ||||| | ||||| || ||| | Sbjct 358407 ATGCAGATTTTTGTGAAGACCCTCACAGGCAAGACTATCACATTGGAAGTGGA-GCCGTC 358465 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || ||| | || ||| || || || |||||||| || || || ||||| Sbjct 358466 TGACACCATTGAGAATGTGAAAGCTAAGATCCAGGACAAAGAGGGAATCCCCCCAGATCA 358525 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTAC 25351 ||| || || || | | ||||||||| || || |||| |||| |||| ||| || Sbjct 358526 GCAGAGGCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCAGAACCTTGTC--CGACTAT 358583 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 || || || ||||||||||| | ||||| ||| | ||| | |||||||| || Sbjct 358584 AACATCCAGAAAGAATCCACACTCCATTTGGTGCTCAGACTCAGAGGAGGTAA 358636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445070298138240