Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq695 127 3e-23 >seq695 Length=442779 Score = 127 bits (140), Expect = 3e-23 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | ||||| ||||||||| || ||| || ||||| || | Sbjct 67044 ATCTACAAGGTGTTGAAGCAAGTGCACCCCGACAC---TGGCATCTCTTCCAA--AG-CT 66991 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || || || ||||| |||| |||||| |||||||| | Sbjct 66990 ATGTCTATCATGAACTCTTTCGTGAATGACATCTTCGAGCGCATCTCTGCCGAGGCCAGC 66931 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || || | | ||||||| | | ||| ||| | | || |||||||||||||| || Sbjct 66930 CGTCTCGCTCATTACAACAAGAGGAGCACCATCACCTCCCGAGAGATCCAGACCGCTGTC 66871 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||| || ||| ||||| || |||| |||||| ||| ||||| |||| Sbjct 66870 AGGCTGCTCTTGCCAGGCGAGCTCGCCAAGCACGCTGTCAGTGAGGGAACCA 66819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177393370637784