Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq769 107 2e-18 seq156 93.3 4e-14 seq170 91.5 1e-13 >seq769 Length=365539 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||||||||||| || | ||| |||||||||||||||||| || | | Sbjct 68588 CCACCACGGAGTCTCAACACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAC 68647 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || |||||||| || ||||| ||||||| ||||||||| | |||| Sbjct 68648 AACGTACGACCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGAGGA 68707 Query 35630 ACGC 35633 | || Sbjct 68708 ATGC 68711 >seq156 Length=1397929 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 ||||||||||| | | ||| || | ||| | || ||| || || |||||||| ||| Sbjct 360900 TTTCCACCACGCAGACGCAAGACTAGATGAAGGGTTGACTCTTTCTGGATGTTGTAGTCG 360841 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | |||||| || | || || ||||| || || ||||| || | || ||||| || | Sbjct 360840 GACAAGGTACGGCCATCTTCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGG 360781 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT--- 35683 |||| | ||| ||||| ||| || ||||| | | | ||||| |||| Sbjct 360780 GGAATTCCCTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTGTC---CGATGGC 360724 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| |||| ||||| ||||| || |||| || || ||||| |||||||| Sbjct 360723 TCCACTTCCAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 360671 >seq170 Length=1283570 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || || ||||| || | || || || | || ||||||||||| || ||||| Sbjct 1121682 CTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 1121741 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | | || |||||| ||||| ||||| | | Sbjct 1121742 GATCAGACGCTGCTGGTCAGGGGGGATCCCTTCTTTGTCCTGTATCTTGGCCTTCACATT 1121801 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | ||||||||| | ||||| || || || || | |||||||| Sbjct 1121802 CTCAATAGTGTCCGATGGTTCCACCTCAAGGGTGATTGTCTTGCCAGTAAGTGTTTTCAC 1121861 Query 35725 AAATATCTGCATTCTGT 35741 ||| ||||||| ||||| Sbjct 1121862 AAAGATCTGCA-TCTGT 1121877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450769189526560