Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq284 93.3 6e-14 >seq284 Length=917541 Score = 93.3 bits (102), Expect = 6e-14 Identities = 157/224 (70%), Gaps = 5/224 (2%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||| |||| || || | || ||| |||||||| |||||||| | || | ||| | Sbjct 769016 CCTCGTCTCGGCTGATGAGCTCATTACTGAATGTGAGACCAGGCATGATTCCCCTCTTCT 768957 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | | ||| || || ||||| || || ||||| |||||||||||||| || || ||||| | Sbjct 768956 TCAACCAGAAGATTGCAGCGAAGGAGCCAGAGAAGAAGATGCCTTCAACAGCAGCAAAAG 768897 Query 39759 CAACAAGTCTCTCTCCGTA---ACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAG 39815 |||||| | ||| |||| | ||||| | |||||||| ||||| || | Sbjct 768896 CAACAACACGCTCAGCGTAGGGGGAAGAATCATCACCGATCCACTTGATAGCCCAGTCTG 768837 Query 39816 CTTTCTTCT-TTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 | || |||| | ||||| |||| || || || || || || || Sbjct 768836 CCTT-TTCTCTGACACACGGCAAGGTCTCGATGGCGTTGAACAG 768794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686871603888480