Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_027352.1 Length=159492 Score E Sequences producing significant alignments: (Bits) Value seq971 84.2 2e-11 seq467 84.2 2e-11 >seq971 Length=245085 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 157757 GGATTCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAACTGAGCTAAGAA 157816 |||||||||||| |||||| |||||||| |||||| |||||||||||||||||||| | | Sbjct 222507 GGATTCGAACCCTCGACCTTCTGCTTACTAGGCAGACGCTCTAACCAACTGAGCTATGGA 222566 Query 157817 GGCA 157820 | || Sbjct 222567 GCCA 222570 Score = 84.2 bits (92), Expect = 2e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 157757 GGATTCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAACTGAGCTA 157812 |||||||||||| |||||| |||||||| |||||| |||||||||||||||||||| Sbjct 223878 GGATTCGAACCCTCGACCTTCTGCTTACTAGGCAGACGCTCTAACCAACTGAGCTA 223933 Score = 84.2 bits (92), Expect = 2e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 157757 GGATTCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAACTGAGCTA 157812 |||||||||||| |||||| |||||||| |||||| |||||||||||||||||||| Sbjct 226628 GGATTCGAACCCTCGACCTTCTGCTTACTAGGCAGACGCTCTAACCAACTGAGCTA 226683 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 157757 GGATTCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAACTGAGCTAAGAA 157816 |||||||||||| |||||| |||||||| |||||| |||||||||||||||||||| | | Sbjct 243119 GGATTCGAACCCTCGACCTTCTGCTTACTAGGCAGACGCTCTAACCAACTGAGCTATGGA 243178 Query 157817 GGCA 157820 | || Sbjct 243179 GCCA 243182 >seq467 Length=647259 Score = 84.2 bits (92), Expect = 2e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 157757 GGATTCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAACTGAGCTA 157812 |||||||||||| |||||| |||||||| |||||| |||||||||||||||||||| Sbjct 388588 GGATTCGAACCCTCGACCTTCTGCTTACTAGGCAGACGCTCTAACCAACTGAGCTA 388643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510218770157440