Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq284 84.2 3e-11 >seq284 Length=917541 Score = 84.2 bits (92), Expect = 3e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737 |||| |||||| || || ||||| ||| ||||| ||||||| |||| ||||| Sbjct 769016 CCTCGTCTCGGCTGATGAGCTCATTACTGAATGTGAGACCAGGCATGATTCCCCTCTTCT 768957 Query 122738 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 122797 ||||||| | || || ||| || || ||||||||||| || || ||| ||||| | Sbjct 768956 TCAACCAGAAGATTGCAGCGAAGGAGCCAGAGAAGAAGATGCCTTCAACAGCAGCAAAAG 768897 Query 122798 CAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGCCCATTTCG 122857 ||| || || || ||| ||| | ||| | || | | ||| || || ||||| | | Sbjct 768896 CAACAACACGCTCAGCGTAGGGGGAAGAATCATCACCGATCCACTTGATAGCCCAGTCTG 768837 Query 122858 CCTTCTTCTC-AATACATGGTACAGTTTGGATGGC 122891 |||| ||||| | ||| || | || | |||||| Sbjct 768836 CCTT-TTCTCTGACACACGGCAAGGTCTCGATGGC 768803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627997992067200