Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq284 120 4e-22 seq677 95.1 1e-14 >seq284 Length=917541 Score = 120 bits (132), Expect = 4e-22 Identities = 157/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 ||||||| ||| |||||| ||||| ||| ||||| ||||||| |||| ||||| Sbjct 769016 CCTCGTCTCGGCTGATGAGCTCATTACTGAATGTGAGACCAGGCATGATTCCCCTCTTCT 768957 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 |||||||||| || ||| || ||||||||||||||||| || || ||| || || | Sbjct 768956 TCAACCAGAAGATTGCAGCGAAGGAGCCAGAGAAGAAGATGCCTTCAACAGCAGCAAAAG 768897 Query 130155 CAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCCCACTGCG 130214 ||| | ||||||||| ||| | || | | | | |||||| || ||||| | | Sbjct 768896 CAACAACACGCTCAGCGTAGGGGGAAGAATCATCACCGATCCACTTGATAGCCCAGTCTG 768837 Query 130215 CCTTTT-TCTCGATACACGGGACGGTCTGGATCGC 130248 |||||| ||| || |||||| | ||||| ||| || Sbjct 768836 CCTTTTCTCT-GACACACGGCAAGGTCTCGATGGC 768803 >seq677 Length=433858 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCC 118798 |||||| | | |||||||| | ||| || ||||||||||| || ||| |||||||| Sbjct 166438 CTCATCAGGAGCGGTGTACTCCACAATCTCTGTGCACAAGTTGCTACACTTGATGGTGCC 166379 Query 118799 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 118858 || ||||| || || |||||| |||||| || ||||| | |||||| || || || Sbjct 166378 CAGGTTCTGCTGGTTGGACTTTCGGTTACAGCTGTCTTTGTACAACATGTACGGAGTTCC 166319 Query 118859 CGTCTCCGTTTGGGACT 118875 |||||||| || |||| Sbjct 166318 TGTCTCCGTCTGTGACT 166302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618401711733920